12627_YJR091C (Saccharomyces paradoxus)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		12627_YJR091C T25380_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
12627_YJR091C RRM 389 442
12627_YJR091C PUF 646 680
12627_YJR091C PUF 682 717
12627_YJR091C PUF 719 752
12627_YJR091C PUF 754 789
12627_YJR091C PUF 793 827

Links

Other PUF,RRM family RBPs
Other Saccharomyces paradoxus RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
JSN1 Saccharomyces cerevisiae YJR091C N 0.991
SAKL0F14102g Lachancea kluyveri SAKL0F14102g N 0.775
Kwal_14395 Kluyveromyces waltii Kwal_14395 N 0.779
KLTH0F07524g Kluyveromyces thermotolerans KLTH0F07524g N 0.805
KLLA0E06029g Kluyveromyces lactis KLLA0E06029g N 0.788
CAGL0M09108g Candida glabrata CAGL0M09108g N 0.861
A7TM89_VANPO Vanderwaltozyma polyspora A7TM89_VANPO N 0.818
A7TIG6_VANPO Vanderwaltozyma polyspora A7TIG6_VANPO N 0.775
12964_YJR091C Saccharomyces bayanus 12964_YJR091C N 0.970
12521_YJR091C Saccharomyces mikatae 12521_YJR091C N 0.957
Scas_Contig674.27 Saccharomyces castellii Scas_Contig674.27 N 0.822
ZYRO0G17446g Zygosaccharomyces rouxii ZYRO0G17446g N 0.809