CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SAKL0F14102g
(
Lachancea kluyveri
)
PUF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
PF00076 (RRM_1)
IPR001313
IPR000504
SAKL0F14102g
T25406_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0F14102g
RRM
348
402
TINLTSTSLATLCLKFGNVLSARTLKGVNMALVEFDSVDAALHAKEALNGKEVSL
SAKL0F14102g
PUF
601
635
AMLDELPELSSDYLGNTIVQKLFEHSSTIVKDTML
SAKL0F14102g
PUF
638
670
TNRYLTSMGVHKNGTWACQKMITMSDTPRQKVL
SAKL0F14102g
PUF
675
707
VERYCTPLFNDQFGNYVIQCVLKFGPPWNNFIF
SAKL0F14102g
PUF
709
744
SIVSNFWIIAQNRYGARAVRACLESHDIITEEQLLV
SAKL0F14102g
PUF
748
782
MIVLYAEYLATNTNGALLVTWFLDTCTLPHRHSIL
Links
Other
PUF,RRM
family RBPs
Other
Lachancea kluyveri
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
KLTH0F07524g
Kluyveromyces thermotolerans
KLTH0F07524g
N
0.870
Kwal_14395
Kluyveromyces waltii
Kwal_14395
N
0.848
KLLA0E06029g
Kluyveromyces lactis
KLLA0E06029g
N
0.822
A7TIG6_VANPO
Vanderwaltozyma polyspora
A7TIG6_VANPO
N
0.779
ZYRO0G17446g
Zygosaccharomyces rouxii
ZYRO0G17446g
N
0.779
12627_YJR091C
Saccharomyces paradoxus
12627_YJR091C
N
0.775
CAGL0M09108g
Candida glabrata
CAGL0M09108g
N
0.775
JSN1
Saccharomyces cerevisiae
YJR091C
N
0.775
12964_YJR091C
Saccharomyces bayanus
12964_YJR091C
N
0.766
12521_YJR091C
Saccharomyces mikatae
12521_YJR091C
N
0.766
Scas_Contig674.27
Saccharomyces castellii
Scas_Contig674.27
N
0.758
A7TM89_VANPO
Vanderwaltozyma polyspora
A7TM89_VANPO
N
0.753