CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Kwal_14395
(
Kluyveromyces waltii
)
PUF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
PF00076 (RRM_1)
IPR001313
IPR000504
Kwal_14395
T25402_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_14395
RRM
363
416
INLTSTSLATLCLKFGNVISARTLKRINMAIVEFDSVESAMRAKEALHGKEVSL
Kwal_14395
PUF
618
652
TMLDELPELCSDYLGNTIAQKLFEHSSTVIKDIML
Kwal_14395
PUF
654
688
QTNTFLTSMGVHKNGTWACQKIITMADTPRQKALV
Kwal_14395
PUF
691
724
GVEKYCTPLFNDQFGNYVIQCVLKFGFPWNNFIF
Kwal_14395
PUF
727
760
IISNFWTIAQNRYGARAVRACLEAHDIITREQLL
Kwal_14395
PUF
765
799
MIVLYSEYLATNSNGALLVTWFLDTCTLPHRHTIL
Links
Other
PUF,RRM
family RBPs
Other
Kluyveromyces waltii
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
KLTH0F07524g
Kluyveromyces thermotolerans
KLTH0F07524g
N
0.952
SAKL0F14102g
Lachancea kluyveri
SAKL0F14102g
N
0.848
KLLA0E06029g
Kluyveromyces lactis
KLLA0E06029g
N
0.833
ZYRO0G17446g
Zygosaccharomyces rouxii
ZYRO0G17446g
N
0.792
CAGL0M09108g
Candida glabrata
CAGL0M09108g
N
0.779
12627_YJR091C
Saccharomyces paradoxus
12627_YJR091C
N
0.779
JSN1
Saccharomyces cerevisiae
YJR091C
N
0.779
A7TIG6_VANPO
Vanderwaltozyma polyspora
A7TIG6_VANPO
N
0.772
12964_YJR091C
Saccharomyces bayanus
12964_YJR091C
N
0.771
Scas_Contig674.27
Saccharomyces castellii
Scas_Contig674.27
N
0.765
A7TM89_VANPO
Vanderwaltozyma polyspora
A7TM89_VANPO
N
0.761
12521_YJR091C
Saccharomyces mikatae
12521_YJR091C
N
0.758