CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KLLA0E06029g
(
Kluyveromyces lactis
)
PUF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
PF00076 (RRM_1)
IPR001313
IPR000504
KLLA0E06029g
T25400_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLLA0E06029g
RRM
396
450
TVNLTSTSLATLCLKFGTVISARTLRGVNMAIVEFASVEAAIKAKEALNGKEVSL
KLLA0E06029g
PUF
634
668
AMLDEIPELSSDYLGNTIVQKLFEHASSVIKDIML
KLLA0E06029g
PUF
670
704
KTSVYLTSMGVHKNGTWACQKMITNADTPRQKMYV
KLLA0E06029g
PUF
707
740
GVYKYCTPLFNDQFGNYVIQCVLKFGFPWNNFIF
KLLA0E06029g
PUF
743
777
IVSNFWNIVQNRYGARAVRACLEAHDIITQEQLLL
KLLA0E06029g
PUF
783
815
VFFVKYLATNSNGALLVTWFLDTCTLPKRHSIL
Links
Other
PUF,RRM
family RBPs
Other
Kluyveromyces lactis
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
KLTH0F07524g
Kluyveromyces thermotolerans
KLTH0F07524g
N
0.846
Kwal_14395
Kluyveromyces waltii
Kwal_14395
N
0.833
SAKL0F14102g
Lachancea kluyveri
SAKL0F14102g
N
0.822
12627_YJR091C
Saccharomyces paradoxus
12627_YJR091C
N
0.788
JSN1
Saccharomyces cerevisiae
YJR091C
N
0.788
12964_YJR091C
Saccharomyces bayanus
12964_YJR091C
N
0.775
A7TIG6_VANPO
Vanderwaltozyma polyspora
A7TIG6_VANPO
N
0.773
12521_YJR091C
Saccharomyces mikatae
12521_YJR091C
N
0.766
CAGL0M09108g
Candida glabrata
CAGL0M09108g
N
0.762
ZYRO0G17446g
Zygosaccharomyces rouxii
ZYRO0G17446g
N
0.758
Scas_Contig674.27
Saccharomyces castellii
Scas_Contig674.27
N
0.757
A7TM89_VANPO
Vanderwaltozyma polyspora
A7TM89_VANPO
N
0.757