Scas_Contig674.27 (Saccharomyces castellii)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		Scas_Contig674.27 T25377_0.6 SGD (2003-Oct-3)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig674.27 RRM 349 402
Scas_Contig674.27 PUF 608 641
Scas_Contig674.27 PUF 643 678
Scas_Contig674.27 PUF 680 713
Scas_Contig674.27 PUF 715 749
Scas_Contig674.27 PUF 756 788

Links

Other PUF,RRM family RBPs
Other Saccharomyces castellii RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
JSN1 Saccharomyces cerevisiae YJR091C N 0.822
12627_YJR091C Saccharomyces paradoxus 12627_YJR091C N 0.822
12964_YJR091C Saccharomyces bayanus 12964_YJR091C N 0.813
CAGL0M09108g Candida glabrata CAGL0M09108g N 0.812
12521_YJR091C Saccharomyces mikatae 12521_YJR091C N 0.804
ZYRO0G17446g Zygosaccharomyces rouxii ZYRO0G17446g N 0.795
A7TM89_VANPO Vanderwaltozyma polyspora A7TM89_VANPO N 0.788
KLTH0F07524g Kluyveromyces thermotolerans KLTH0F07524g N 0.778
Kwal_14395 Kluyveromyces waltii Kwal_14395 N 0.765
SAKL0F14102g Lachancea kluyveri SAKL0F14102g N 0.758
KLLA0E06029g Kluyveromyces lactis KLLA0E06029g N 0.757
A7TIG6_VANPO Vanderwaltozyma polyspora A7TIG6_VANPO N 0.748