yaf2 (Xenopus tropicalis)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 ENSXETG00000006795 T26905_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000014836 RanBP ZF 20 46

Links

Other RanBP ZF family RBPs
Other Xenopus tropicalis RBPs

102 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.926
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.852
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.852
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.963
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.926
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.852
RYBP Vicugna pacos ENSVPAG00000007715 N 0.815
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.926
rybp Xenopus tropicalis ENSXETG00000015914 N 0.926
RYBP Drosophila melanogaster FBgn0034763 N 0.786
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.750
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.852
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.963
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.852
RYBP Pan troglodytes ENSPTRG00000015105 N 0.852
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.852
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.926
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.926
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.852
RYBP Sorex araneus ENSSARG00000011312 N 0.852
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.852
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.852
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.963
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.852
GF11639 Drosophila ananassae FBgn0088679 N 0.786
GG22783 Drosophila erecta FBgn0114948 N 0.786
GH19772 Drosophila grimshawi FBgn0127236 N 0.786
fgenesh2_pg.scaffold_670000003 Branchiostoma floridae fgenesh2_pg.scaffold_670000003 N 0.852
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 0.852
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.852
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.926
XP_001183392.1 Strongylocentrotus purpuratus XP_001183392.1 N 0.741
XP_780545.1 Strongylocentrotus purpuratus XP_780545.1 N 0.741
AAH73220 Xenopus laevis AAH73220 N 1.000
AAI06269 Xenopus laevis AAI06269 N 1.000
AAI55956 Xenopus laevis AAI55956 N 0.857
AAI69358 Xenopus laevis AAI69358 N 0.857
fgenesh1_pg.C_scaffold_97000016 Daphnia pulex fgenesh1_pg.C_scaffold_97000016 N 0.786
estExt_fgenesh1_pg.C_1000062 Nematostella vectensis estExt_fgenesh1_pg.C_1000062 N 0.724
e_gw1.50.264.1 Lottia gigantea e_gw1.50.264.1 N 0.741
GI20311 Drosophila mojavensis FBgn0143047 N 0.786
GL11369 Drosophila persimilis FBgn0148978 N 0.750
GM15940 Drosophila sechellia FBgn0170856 N 0.786
GD11693 Drosophila simulans FBgn0183433 N 0.786
GJ22038 Drosophila virilis FBgn0209152 N 0.786
GK21447 Drosophila willistoni FBgn0223439 N 0.786
GE14012 Drosophila yakuba FBgn0231642 N 0.786
ISCW017896 Ixodes scapularis ISCW017896 N 0.724
193935 Helobdella robusta 193935 N 0.852
e_gw1.39.163.1 Capitella teleta e_gw1.39.163.1 N 0.750
AAI69386 Xenopus laevis AAI69386 N 0.857
CpipJ_CPIJ008195 Culex pipiens CpipJ_CPIJ008195 N 0.714
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.926
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.926
yaf2 Danio rerio ENSDARG00000015966 N 0.889
rybpa Danio rerio ENSDARG00000037773 N 0.852
rybpb Danio rerio ENSDARG00000053459 N 0.815
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.852
LOC100062395 Equus caballus ENSECAG00000000266 N 0.852
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.852
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.852
YAF2 Echinops telfairi ENSETEG00000001634 N 0.821
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.852
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.852
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.926
amel4_ncbi_hmm6926 Apis mellifera amel4_ncbi_hmm6926 N 0.793
amel4_ncbi_hmm6926 Tribolium castaneum amel4_ncbi_hmm6926 N 0.793
nasonia_NCBI_hmm137104 Nasonia vitripennis nasonia_NCBI_hmm137104 N 0.759
AAEL008263 Aedes aegypti AAEL008263 N 0.714
AGAP010288 Anopheles gambiae AGAP010288 N 0.786
CPIJ008195 Culex quinquefasciatus CPIJ008195 N 0.714
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.926
RYBP Anolis carolinensis ENSACAG00000014789 N 0.852
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.926
RYBP Canis familiaris ENSCAFG00000006441 N 0.852
RYBP Echinops telfairi ENSETEG00000015145 N 0.815
YAF2 Homo sapiens ENSG00000015153 N 0.926
RYBP Homo sapiens ENSG00000163602 N 0.852
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.926
Yaf2 Mus musculus ENSMUSG00000022634 N 0.926
ENSMUSG00000055763 Mus musculus ENSMUSG00000055763 N 0.786
Rybp Mus musculus ENSMUSG00000072872 N 0.852
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.852
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.852
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.852
YAF2 Oryzias latipes ENSORLG00000003255 N 0.852
YAF2 Oryzias latipes ENSORLG00000013064 N 0.852
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.926
RYBP Monodelphis domestica ENSMODG00000003921 N 0.852
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.926
RYBP Macaca mulatta ENSMMUG00000007128 N 0.852
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.815
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.815
RYBP Gallus gallus ENSGALG00000007790 N 0.852
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.926
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.926
RYBP Loxodonta africana ENSLAFG00000003133 N 0.815
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.889
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.926
RYBP Microcebus murinus ENSMICG00000014365 N 0.852
ENSMLUG00000015085 Myotis lucifugus ENSMLUG00000015085 N 0.815
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.852