rybpb (Danio rerio)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 ENSDARG00000053459 T26373_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000069979 RanBP ZF 20 46

Links

Other RanBP ZF family RBPs
Other Danio rerio RBPs

93 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RYBP Monodelphis domestica ENSMODG00000003921 N 0.963
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.963
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.963
RYBP Macaca mulatta ENSMMUG00000007128 N 0.963
RYBP Microcebus murinus ENSMICG00000014365 N 0.963
ENSMLUG00000015085 Myotis lucifugus ENSMLUG00000015085 N 0.963
Rybp Mus musculus ENSMUSG00000072872 N 0.963
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.963
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.963
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.963
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.963
RYBP Sorex araneus ENSSARG00000011312 N 0.963
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.963
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.963
RYBP Pan troglodytes ENSPTRG00000015105 N 0.963
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.963
RYBP Canis familiaris ENSCAFG00000006441 N 0.963
RYBP Homo sapiens ENSG00000163602 N 0.963
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.963
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.963
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.963
RYBP Anolis carolinensis ENSACAG00000014789 N 0.963
LOC100062395 Equus caballus ENSECAG00000000266 N 0.963
rybpa Danio rerio ENSDARG00000037773 N 0.963
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.963
RYBP Gallus gallus ENSGALG00000007790 N 0.963
RYBP Loxodonta africana ENSLAFG00000003133 N 0.926
RYBP Vicugna pacos ENSVPAG00000007715 N 0.926
RYBP Echinops telfairi ENSETEG00000015145 N 0.926
ENSMUSG00000055763 Mus musculus ENSMUSG00000055763 N 0.893
rybp Xenopus tropicalis ENSXETG00000015914 N 0.889
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.889
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.889
YAF2 Oryzias latipes ENSORLG00000003255 N 0.889
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.889
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.852
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.852
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.852
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.852
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.852
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.852
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.852
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.852
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.852
YAF2 Homo sapiens ENSG00000015153 N 0.852
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.852
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.852
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.852
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.852
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.852
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.852
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.852
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.852
Yaf2 Mus musculus ENSMUSG00000022634 N 0.852
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.852
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.852
AAI69386 Xenopus laevis AAI69386 N 0.821
AAI55956 Xenopus laevis AAI55956 N 0.821
AAI69358 Xenopus laevis AAI69358 N 0.821
AAH73220 Xenopus laevis AAH73220 N 0.815
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 0.815
AAI06269 Xenopus laevis AAI06269 N 0.815
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.815
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.815
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.815
yaf2 Xenopus tropicalis ENSXETG00000006795 N 0.815
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.815
fgenesh2_pg.scaffold_670000003 Branchiostoma floridae fgenesh2_pg.scaffold_670000003 N 0.815
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.815
YAF2 Echinops telfairi ENSETEG00000001634 N 0.786
GM15940 Drosophila sechellia FBgn0170856 N 0.786
GH19772 Drosophila grimshawi FBgn0127236 N 0.786
GI20311 Drosophila mojavensis FBgn0143047 N 0.786
GG22783 Drosophila erecta FBgn0114948 N 0.786
GF11639 Drosophila ananassae FBgn0088679 N 0.786
RYBP Drosophila melanogaster FBgn0034763 N 0.786
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.786
GL11369 Drosophila persimilis FBgn0148978 N 0.786
GD11693 Drosophila simulans FBgn0183433 N 0.786
GK21447 Drosophila willistoni FBgn0223439 N 0.786
GE14012 Drosophila yakuba FBgn0231642 N 0.786
GJ22038 Drosophila virilis FBgn0209152 N 0.786
193935 Helobdella robusta 193935 N 0.778
YAF2 Oryzias latipes ENSORLG00000013064 N 0.778
yaf2 Danio rerio ENSDARG00000015966 N 0.778
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.778
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.778
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.778
AGAP010288 Anopheles gambiae AGAP010288 N 0.750
fgenesh1_pg.C_scaffold_97000016 Daphnia pulex fgenesh1_pg.C_scaffold_97000016 N 0.750
e_gw1.50.264.1 Lottia gigantea e_gw1.50.264.1 N 0.704
XP_780545.1 Strongylocentrotus purpuratus XP_780545.1 N 0.704
XP_001183392.1 Strongylocentrotus purpuratus XP_001183392.1 N 0.704