CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMUSG00000055763
(
Mus musculus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSMUSG00000055763
T26631_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000063241
RanBP ZF
22
49
EGFWDCSVCTFRNSAEAFKCSICDVLKG
Links
Other
RanBP ZF
family RBPs
Other
Mus musculus
RBPs
90 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RYBP
Taeniopygia guttata
ENSTGUG00000009932
N
0.929
RYBP
Dasypus novemcinctus
ENSDNOG00000015175
N
0.929
RYBP
Tupaia belangeri
ENSTBEG00000003789
N
0.929
RYBP
Monodelphis domestica
ENSMODG00000003921
N
0.929
Rybp
Rattus norvegicus
ENSRNOG00000005353
N
0.929
RYBP
Anolis carolinensis
ENSACAG00000014789
N
0.929
RYBP
Gallus gallus
ENSGALG00000007790
N
0.929
Rybp
Mus musculus
ENSMUSG00000072872
N
0.929
Ame_R002450
Ailuropoda melanoleuca
Ame_R002450
N
0.929
RYBP
Tursiops truncatus
ENSTTRG00000005375
N
0.929
RYBP
Homo sapiens
ENSG00000163602
N
0.929
RYBP
Canis familiaris
ENSCAFG00000006441
N
0.929
RYBP
Sorex araneus
ENSSARG00000011312
N
0.929
LOC100393237
Callithrix jacchus
ENSCJAG00000015125
N
0.929
RYBP
Microcebus murinus
ENSMICG00000014365
N
0.929
ENSEEUG00000011620
Erinaceus europaeus
ENSEEUG00000011620
N
0.929
LOC100062395
Equus caballus
ENSECAG00000000266
N
0.929
ENSPPYG00000013718
Pongo pygmaeus
ENSPPYG00000013718
N
0.929
RYBP
Choloepus hoffmanni
ENSCHOG00000011528
N
0.929
RYBP
Pteropus vampyrus
ENSPVAG00000012905
N
0.929
RYBP
Macaca mulatta
ENSMMUG00000007128
N
0.929
RYBP
Pan troglodytes
ENSPTRG00000015105
N
0.929
RYBP
Oryctolagus cuniculus
ENSOCUG00000011730
N
0.929
RYBP
Otolemur garnettii
ENSOGAG00000007809
N
0.929
RYBP
Vicugna pacos
ENSVPAG00000007715
N
0.893
RYBP
Echinops telfairi
ENSETEG00000015145
N
0.893
RYBP
Loxodonta africana
ENSLAFG00000003133
N
0.893
ENSMLUG00000015085
Myotis lucifugus
ENSMLUG00000015085
N
0.893
rybpb
Danio rerio
ENSDARG00000053459
N
0.893
rybpa
Danio rerio
ENSDARG00000037773
N
0.857
RYBP
Tetraodon nigroviridis
ENSTNIG00000007355
N
0.857
rybp
Xenopus tropicalis
ENSXETG00000015914
N
0.857
RYBP
Takifugu rubripes
ENSTRUG00000009347
N
0.857
LOC100410479
Callithrix jacchus
ENSCJAG00000017762
N
0.821
YAF2
Cavia porcellus
ENSCPOG00000015156
N
0.821
YAF2
Choloepus hoffmanni
ENSCHOG00000002266
N
0.821
YAF2
Anolis carolinensis
ENSACAG00000003204
N
0.821
Ame_R009996
Ailuropoda melanoleuca
Ame_R009996
N
0.821
YAF2
Macaca mulatta
ENSMMUG00000010868
N
0.821
Q0VC56_BOVIN
Bos taurus
ENSBTAG00000015025
N
0.821
Yaf2
Mus musculus
ENSMUSG00000022634
N
0.821
Yaf2
Rattus norvegicus
ENSRNOG00000004773
N
0.821
YAF2
Pteropus vampyrus
ENSPVAG00000016833
N
0.821
YAF2
Taeniopygia guttata
ENSTGUG00000005817
N
0.821
YAF2
Monodelphis domestica
ENSMODG00000008906
N
0.821
RYBP
Gasterosteus aculeatus
ENSGACG00000011809
N
0.821
YAF2
Gorilla gorilla
ENSGGOG00000007230
N
0.821
YAF2
Tursiops truncatus
ENSTTRG00000001376
N
0.821
YAF2
Vicugna pacos
ENSVPAG00000012039
N
0.821
YAF2
Macropus eugenii
ENSMEUG00000012378
N
0.821
YAF2
Homo sapiens
ENSG00000015153
N
0.821
YAF2
Oryzias latipes
ENSORLG00000003255
N
0.821
ENSPPYG00000004421
Pongo pygmaeus
ENSPPYG00000004421
N
0.821
YAF2
Pan troglodytes
ENSPTRG00000004837
N
0.821
Q5ZKC5_CHICK
Gallus gallus
ENSGALG00000009540
N
0.821
AAI69358
Xenopus laevis
AAI69358
N
0.793
AAI69386
Xenopus laevis
AAI69386
N
0.793
AAI55956
Xenopus laevis
AAI55956
N
0.793
yaf2
Xenopus tropicalis
ENSXETG00000006795
N
0.786
YAF2
Gasterosteus aculeatus
ENSGACG00000004103
N
0.786
YAF2
Loxodonta africana
ENSLAFG00000014339
N
0.786
gw.67.121.1
Branchiostoma floridae
gw.67.121.1
N
0.786
AAI06269
Xenopus laevis
AAI06269
N
0.786
AAH73220
Xenopus laevis
AAH73220
N
0.786
fgenesh2_pg.scaffold_670000003
Branchiostoma floridae
fgenesh2_pg.scaffold_670000003
N
0.786
GK21447
Drosophila willistoni
FBgn0223439
N
0.759
GH19772
Drosophila grimshawi
FBgn0127236
N
0.759
GG22783
Drosophila erecta
FBgn0114948
N
0.759
GE14012
Drosophila yakuba
FBgn0231642
N
0.759
RYBP
Drosophila melanogaster
FBgn0034763
N
0.759
GI20311
Drosophila mojavensis
FBgn0143047
N
0.759
GF11639
Drosophila ananassae
FBgn0088679
N
0.759
GM15940
Drosophila sechellia
FBgn0170856
N
0.759
GD11693
Drosophila simulans
FBgn0183433
N
0.759
GJ22038
Drosophila virilis
FBgn0209152
N
0.759
YAF2
Spermophilus tridecemlineatus
ENSSTOG00000007224
N
0.750
YAF2
Oryctolagus cuniculus
ENSOCUG00000007321
N
0.750
YAF2
Oryzias latipes
ENSORLG00000013064
N
0.750
YAF2
Tetraodon nigroviridis
ENSTNIG00000015988
N
0.750
YAF2
Takifugu rubripes
ENSTRUG00000016767
N
0.750
YAF2
Erinaceus europaeus
ENSEEUG00000004713
N
0.750
YAF2
Takifugu rubripes
ENSTRUG00000016786
N
0.750
YAF2
Tetraodon nigroviridis
ENSTNIG00000018505
N
0.750
fgenesh1_pg.C_scaffold_97000016
Daphnia pulex
fgenesh1_pg.C_scaffold_97000016
N
0.724
GA11466-RA
Drosophila pseudoobscura
FBgn0071517
N
0.724
GL11369
Drosophila persimilis
FBgn0148978
N
0.724
AGAP010288
Anopheles gambiae
AGAP010288
N
0.724
YAF2
Echinops telfairi
ENSETEG00000001634
N
0.724
yaf2
Danio rerio
ENSDARG00000015966
N
0.714
193935
Helobdella robusta
193935
N
0.714