PK01923.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK01923.1 T31625_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK01923.1 RRM 8 77
PK01923.1 RRM 312 382
PK01923.1 RRM 508 571
PK01923.1 RRM 628 703
PK01923.1 RRM 728 798

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00012163001 Vitis vinifera GSVIVG00012163001 N 0.717
LjT23J20.40.nc Lotus japonicus LjT23J20.40.nc N 0.702
LjT23J20.20.nc Lotus japonicus LjT23J20.20.nc N 0.733
mgf010702m Mimulus guttatus mgf010702m N 0.768
mgf006636m Mimulus guttatus mgf006636m N 0.768
Glyma13g09970.1 Glycine max Glyma13g09970.1 N 0.768
Cucsa.107130 Cucumis sativus Cucsa.107130 N 0.748
cassava28560.m1 Manihot esculenta cassava28560.m1 N 0.799
B9GY53_POPTR Populus trichocarpa POPTR_0003s14940 N 0.711
MDP0000289531 Malus x domestica MDP0000289531 N 0.756