MDP0000289531 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000289531 T57584_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000289531 RRM 9 78
MDP0000289531 RRM 311 380
MDP0000289531 RRM 506 570
MDP0000289531 RRM 627 702
MDP0000289531 RRM 726 794

Links

Other RRM family RBPs
Other Malus x domestica RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa001609m Prunus persica ppa001609m N 0.831
cassava28560.m1 Manihot esculenta cassava28560.m1 N 0.815
Glyma13g09970.1 Glycine max Glyma13g09970.1 N 0.778
mgf006636m Mimulus guttatus mgf006636m N 0.761
mgf010702m Mimulus guttatus mgf010702m N 0.758
PK01923.1 Cannabis sativa PK01923.1 N 0.756
Cucsa.107130 Cucumis sativus Cucsa.107130 N 0.752
GSVIVG00012163001 Vitis vinifera GSVIVG00012163001 N 0.735
LjT23J20.20.nc Lotus japonicus LjT23J20.20.nc N 0.732
AT4G19610 Arabidopsis thaliana AT4G19610-TAIR-G N 0.716
B9GY53_POPTR Populus trichocarpa POPTR_0003s14940 N 0.712