PABPC4 (Myotis lucifugus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMLUG00000012068 T38735_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000010997 RRM 13 35
ENSMLUP00000010997 RRM 68 136
ENSMLUP00000010997 RRM 160 229
ENSMLUP00000010997 RRM 263 330

Links

Other RRM family RBPs
Other Myotis lucifugus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPC4 Homo sapiens ENSG00000090621 D 0.753
Gm10110 Mus musculus ENSMUSG00000062093 I 0.742
PABPC4 Oryctolagus cuniculus ENSOCUG00000000562 I 0.753
PABPC4 Ochotona princeps ENSOPRG00000011984 I 0.756
ENSPPYG00000001506 Pongo pygmaeus ENSPPYG00000001506 I 0.753
PABPC4 Pan troglodytes ENSPTRG00000000573 I 0.753
A4IFC3_BOVIN Bos taurus ENSBTAG00000017125 I 0.753
D4AC21_RAT Rattus norvegicus ENSRNOG00000015642 I 0.739
D3ZEY8_RAT Rattus norvegicus ENSRNOG00000028592 I 0.721
PABPC4 Sus scrofa ENSSSCG00000003660 I 0.753
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.703
pabpc4 Xenopus tropicalis ENSXETG00000010946 I 0.734
Pabpc4 Mus musculus ENSMUSG00000011257 I 0.739
PABPC4 Macaca mulatta ENSMMUG00000007497 I 0.753
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.756
A6MKJ4_CALJA Callithrix jacchus ENSCJAG00000002512 I 0.749
PABPC4 Cavia porcellus ENSCPOG00000009552 I 0.749
LOC100054235 Equus caballus ENSECAG00000009396 I 0.756
PABPC4 Erinaceus europaeus ENSEEUG00000002962 I 0.739
PABPC4 Gallus gallus ENSGALG00000003800 I 0.710
PABPC4 Gorilla gorilla ENSGGOG00000004002 I 0.753
PABPC4 Loxodonta africana ENSLAFG00000000151 I 0.756
ENSMICG00000000431 Microcebus murinus ENSMICG00000000431 I 0.756
ENSMICG00000016633 Microcebus murinus ENSMICG00000016633 I 0.710
Ame_R019277 Ailuropoda melanoleuca Ame_R019277 I 0.801