SRSF6 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000014468 T39900_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000012965 RRM 4 40
ENSOGAP00000012965 RRM 112 177

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH46668 Xenopus laevis AAH46668 I 0.000
SRSF6 Tetraodon nigroviridis ENSTNIG00000001692 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.000
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.744
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.000
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.000
Sfrs6 Rattus norvegicus ENSRNOG00000006380 I 0.752
SRSF6 Pteropus vampyrus ENSPVAG00000015232 I 0.744
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.000
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.000
SRSF6 Procavia capensis ENSPCAG00000010954 I 0.752
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.000
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.000
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.000
SRSF6 Oryzias latipes ENSORLG00000003530 I 0.713
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.000
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.000
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.000
SRSF6 Takifugu rubripes ENSTRUG00000003244 I 0.000
AAH44265 Xenopus laevis AAH44265 I 0.000
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.000
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.000
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.000
estExt_Genewise1Plus.C_1640045 Capitella teleta estExt_Genewise1Plus.C_1640045 I 0.000
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.000
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.000
e_gw1.89.27.1 Lottia gigantea e_gw1.89.27.1 I 0.000
PHUM290500 Pediculus humanus PHUM290500 I 0.000
srsf6 Xenopus tropicalis ENSXETG00000025503 I 0.000
srsf4 Xenopus tropicalis ENSXETG00000014380 I 0.000
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.000
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.000
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.000
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.000
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.000
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.760
Srsf4 Mus musculus ENSMUSG00000028911 I 0.000
Srsf6 Mus musculus ENSMUSG00000016921 I 0.752
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.000
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.760
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.760
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.000
srsf6b Danio rerio ENSDARG00000016783 I 0.000
srsf6a Danio rerio ENSDARG00000013729 I 0.705
ENSCSAVG00000002581 Ciona savignyi ENSCSAVG00000002581 I 0.000
SRSF6 Cavia porcellus ENSCPOG00000011761 I 0.705
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.000
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.760
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.000
ENSCING00000012370 Ciona intestinalis ENSCING00000012370 I 0.000
ENSCING00000004873 Ciona intestinalis ENSCING00000004873 I 0.000
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.000
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.752
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.000
SRSF6 Echinops telfairi ENSETEG00000006221 I 0.752
SRSF4 Homo sapiens ENSG00000116350 I 0.000
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.000
SRSF6 Monodelphis domestica ENSMODG00000003107 I 0.752
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.000
SRSF4 Myotis lucifugus ENSMLUG00000014770 I 0.000
SRSF6 Microcebus murinus ENSMICG00000008537 I 0.767
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.000
SRSF6 Macropus eugenii ENSMEUG00000014615 I 0.752
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.000
SRSF6 Anolis carolinensis ENSACAG00000002061 I 0.736
SRSF6 Homo sapiens ENSG00000124193 I 0.760
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.000
SRSF6 Gasterosteus aculeatus ENSGACG00000006084 I 0.000
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.760
SFRS4 Gallus gallus ENSGALG00000001411 N 0.000
SRSF4 Gorilla gorilla ENSGGOG00000002444 N 0.000
SRSF4 Canis familiaris ENSCAFG00000011669 N 0.000
ENSCJAG00000010895 Callithrix jacchus ENSCJAG00000010895 N 0.000
ENSACAG00000004096 Anolis carolinensis ENSACAG00000004096 N 0.000
SRSF4 Ornithorhynchus anatinus ENSOANG00000015169 N 0.000