PPIE (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000001276 T41851_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000001318 RRM 8 78

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa010124m Prunus persica ppa010124m N 0.000
GRMZM2G016296 Zea mays GRMZM2G016296 N 0.000
mgf002522m Mimulus guttatus mgf002522m N 0.000
gw1.7.122.1 Selaginella moellendorfii gw1.7.122.1 N 0.000
Glyma08g07730.1 Glycine max Glyma08g07730.1 N 0.000
Glyma05g24540.1 Glycine max Glyma05g24540.1 N 0.000
estExt_fgenesh1_pg.C_3970019 Physcomitrella patens estExt_fgenesh1_pg.C_3970019 N 0.000
e_gw1.42.218.1 Physcomitrella patens e_gw1.42.218.1 N 0.000
e_gw1.124.43.1 Selaginella moellendorfii e_gw1.124.43.1 N 0.000
Cucsa.393860 Cucumis sativus Cucsa.393860 N 0.000
GRMZM2G025281 Zea mays GRMZM2G025281 N 0.000
GRMZM2G077823 Zea mays GRMZM2G077823 N 0.000
ppa009468m Prunus persica ppa009468m N 0.000
MDP0000729468 Malus x domestica MDP0000729468 N 0.000
MDP0000162476 Malus x domestica MDP0000162476 N 0.000
MDP0000161688 Malus x domestica MDP0000161688 N 0.000
MDP0000129321 Malus x domestica MDP0000129321 N 0.000
chr4.CM0182.440.nc Lotus japonicus chr4.CM0182.440.nc N 0.000
Medtr5g078930 Medicago truncatula Medtr5g078930 N 0.000
GRMZM2G110143 Zea mays GRMZM2G110143 N 0.000
GRMZM2G104353 Zea mays GRMZM2G104353 N 0.000
Cucsa.217920 Cucumis sativus Cucsa.217920 N 0.000
29581.m000256 Ricinus communis 29581.m000256 N 0.000
GSVIVG00009023001 Vitis vinifera GSVIVG00009023001 N 0.000
XM_002866555.1 Arabidopsis lyrata fgenesh2_kg.8__2435__AT5G64200.1 N 0.000
BRADI3G38797 Brachypodium distachyon BRADI3G38797 N 0.000
BRADI1G21390 Brachypodium distachyon BRADI1G21390 N 0.000
BGIOSIBCE028287 Oryza indica BGIOSIBCE028287 N 0.000
BGIOSIBCE025656 Oryza indica BGIOSIBCE025656 N 0.000
BGIOSIBCE011379 Oryza indica BGIOSIBCE011379 N 0.000
ATSC35 Arabidopsis thaliana AT5G64200-TAIR-G N 0.000
PK28446.1 Cannabis sativa PK28446.1 N 0.000
GSVIVG00038734001 Vitis vinifera GSVIVG00038734001 N 0.000
LOC_Os03g27030 Oryza sativa LOC_Os03g27030 N 0.000
scaffold_37200001.1 Arabidopsis lyrata scaffold_37200001.1 N 0.000
Sb07g029000 Sorghum bicolor Sb07g029000 N 0.000
Sb02g039740 Sorghum bicolor Sb02g039740 N 0.000
SB01G033710 Sorghum bicolor Sb01g033710 N 0.000
A9PCL7_POPTR Populus trichocarpa POPTR_0005s17020 N 0.000
B9GZT2_POPTR Populus trichocarpa POPTR_0003s01810 N 0.000
B9GUV2_POPTR Populus trichocarpa POPTR_0002s09630 N 0.000
LOC_Os08g37960 Oryza sativa LOC_Os08g37960 N 0.000
LOC_Os07g43050 Oryza sativa LOC_Os07g43050 N 0.000
PK13173.1 Cannabis sativa PK13173.1 N 0.000