GRMZM2G016296 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G016296 T54008_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G016296_P01 RRM 18 88
GRMZM2G016296_P02 RRM 18 88
GRMZM2G016296_P03 RRM 18 88
GRMZM2G016296_P04 RRM 18 88
GRMZM2G016296_P05 RRM 18 88
GRMZM2G016296_P06 RRM 18 88

Links

Other RRM family RBPs
Other Zea mays RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G110143 Zea mays GRMZM2G110143 N 0.972
Sb07g029000 Sorghum bicolor Sb07g029000 N 0.972
LOC_Os08g37960 Oryza sativa LOC_Os08g37960 N 0.958
BGIOSIBCE028287 Oryza indica BGIOSIBCE028287 N 0.958
BRADI3G38797 Brachypodium distachyon BRADI3G38797 N 0.944
B9GUV2_POPTR Populus trichocarpa POPTR_0002s09630 N 0.901
A9PCL7_POPTR Populus trichocarpa POPTR_0005s17020 N 0.887
Cucsa.393860 Cucumis sativus Cucsa.393860 N 0.887
cassava18324.valid.m1 Manihot esculenta cassava18324.valid.m1 N 0.887
PK28446.1 Cannabis sativa PK28446.1 N 0.887
GSVIVG00009023001 Vitis vinifera GSVIVG00009023001 N 0.887
MDP0000129321 Malus x domestica MDP0000129321 N 0.873
e_gw1.42.218.1 Physcomitrella patens e_gw1.42.218.1 N 0.873
29581.m000256 Ricinus communis 29581.m000256 N 0.873
gw1.7.122.1 Selaginella moellendorfii gw1.7.122.1 N 0.873
LOC_Os07g43050 Oryza sativa LOC_Os07g43050 N 0.859
PK13173.1 Cannabis sativa PK13173.1 N 0.859
Medtr5g078930 Medicago truncatula Medtr5g078930 N 0.859
GSVIVG00038734001 Vitis vinifera GSVIVG00038734001 N 0.859
estExt_fgenesh1_pg.C_3970019 Physcomitrella patens estExt_fgenesh1_pg.C_3970019 N 0.859
B9GZT2_POPTR Populus trichocarpa POPTR_0003s01810 N 0.859
BGIOSIBCE025656 Oryza indica BGIOSIBCE025656 N 0.859
ppa009468m Prunus persica ppa009468m N 0.859
mgf002522m Mimulus guttatus mgf002522m N 0.845
GRMZM2G077823 Zea mays GRMZM2G077823 N 0.845
ATSC35 Arabidopsis thaliana AT5G64200-TAIR-G N 0.845
Cucsa.217920 Cucumis sativus Cucsa.217920 N 0.845
Glyma05g24540.1 Glycine max Glyma05g24540.1 N 0.845
Sb02g039740 Sorghum bicolor Sb02g039740 N 0.845
XM_002866555.1 Arabidopsis lyrata fgenesh2_kg.8__2435__AT5G64200.1 N 0.845
Glyma08g07730.1 Glycine max Glyma08g07730.1 N 0.845
chr4.CM0182.440.nc Lotus japonicus chr4.CM0182.440.nc N 0.845
BRADI1G21390 Brachypodium distachyon BRADI1G21390 N 0.845
GRMZM2G025281 Zea mays GRMZM2G025281 N 0.831
ppa010124m Prunus persica ppa010124m N 0.831
e_gw1.124.43.1 Selaginella moellendorfii e_gw1.124.43.1 N 0.817
LOC_Os03g27030 Oryza sativa LOC_Os03g27030 N 0.803
MDP0000729468 Malus x domestica MDP0000729468 N 0.803
BGIOSIBCE011379 Oryza indica BGIOSIBCE011379 N 0.803
GRMZM2G104353 Zea mays GRMZM2G104353 N 0.775
SB01G033710 Sorghum bicolor Sb01g033710 N 0.775
scaffold_37200001.1 Arabidopsis lyrata scaffold_37200001.1 N 0.761
MDP0000162476 Malus x domestica MDP0000162476 N 0.732