CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM15
(
Takifugu rubripes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTRUG00000002921
T42212_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000006813
RRM
166
231
DLGTQLSDEDVEDGLFHEFKKFGDVSVKISRSNDERIAFVNFRKPEDARAAKHARGRLVLYDRPLK
ENSTRUP00000006813
RRM
338
407
LFLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQVSTYGFLKFENLDMAHRAKLSMSGKVVGRNPIK
ENSTRUP00000006813
RRM
419
482
LWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGHTWAYIQYESLDAAQAACTHMRGFPLGGPER
Links
Other
RRM
family RBPs
Other
Takifugu rubripes
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.000
CpipJ_CPIJ002248
Culex pipiens
CpipJ_CPIJ002248
N
0.000
Ybx1
Dipodomys ordii
ENSDORG00000016627
N
0.000
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
N
0.000
YBX1
Tupaia belangeri
ENSTBEG00000015642
N
0.000
ybx2
Xenopus tropicalis
ENSXETG00000025267
N
0.000
Ame_R016026
Ailuropoda melanoleuca
Ame_R016026
N
0.000