CPEB2 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000013956 T42343_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CPEB2
M012_0.6 		Homo sapiens CHUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00012 		0.910
orb2
M120_0.6 		Drosophila melanogaster KUUUKKK RNAcompete
Ray et al.(2013)
RNCMPT00126 		0.880
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.863
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000035685 RRM 306 372
ENSTRUP00000035685 RRM 414 478
ENSTRUP00000035686 RRM 287 353
ENSTRUP00000035686 RRM 395 459
ENSTRUP00000035687 RRM 258 324
ENSTRUP00000035687 RRM 366 430
ENSTRUP00000035688 RRM 176 242
ENSTRUP00000035688 RRM 284 348

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

152 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava7442.valid.m1 Manihot esculenta cassava7442.valid.m1 N 0.000
MDP0000588137 Malus x domestica MDP0000588137 N 0.000
MDP0000319973 Malus x domestica MDP0000319973 N 0.000
MDP0000271129 Malus x domestica MDP0000271129 N 0.000
MDP0000219767 Malus x domestica MDP0000219767 N 0.000
MDP0000193642 Malus x domestica MDP0000193642 N 0.000
Medtr5g047590 Medicago truncatula Medtr5g047590 N 0.000
Glyma02g13280.1 Glycine max Glyma02g13280.1 N 0.000
Cucsa.327930 Cucumis sativus Cucsa.327930 N 0.000
ppa012381m Prunus persica ppa012381m N 0.000