B9GUX4_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0002s09830 T45457_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.768
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s09830.1 RRM 18 86

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g19360 Oryza sativa LOC_Os01g19360 N 0.000
LOC_Os08g23480 Oryza sativa LOC_Os08g23480 N 0.000
LOC_Os08g34440 Oryza sativa LOC_Os08g34440 N 0.000
LOC_Os08g36160 Oryza sativa LOC_Os08g36160 N 0.000
LOC_Os09g06350 Oryza sativa LOC_Os09g06350 N 0.000
LOC_Os09g07740 Oryza sativa LOC_Os09g07740 N 0.000
LOC_Os09g08310 Oryza sativa LOC_Os09g08310 N 0.000
LOC_Os09g13800 Oryza sativa LOC_Os09g13800 N 0.000
LOC_Os09g21020 Oryza sativa LOC_Os09g21020 N 0.000
LOC_Os10g18190 Oryza sativa LOC_Os10g18190 N 0.000
LOC_Os10g30832 Oryza sativa LOC_Os10g30832 N 0.000
LOC_Os11g29074 Oryza sativa LOC_Os11g29074 N 0.000
LOC_Os11g31970 Oryza sativa LOC_Os11g31970 N 0.000
estExtDG_fgeneshEH_pg.C_1020080 Emiliania huxleyi estExtDG_fgeneshEH_pg.C_1020080 N 0.000
LOC_Os08g19250 Oryza sativa LOC_Os08g19250 N 0.000
LOC_Os06g29300 Oryza sativa LOC_Os06g29300 N 0.000
LOC_Os06g25270 Oryza sativa LOC_Os06g25270 N 0.000
LOC_Os02g13910 Oryza sativa LOC_Os02g13910 N 0.000
LOC_Os02g16520 Oryza sativa LOC_Os02g16520 N 0.000
LOC_Os02g18970 Oryza sativa LOC_Os02g18970 N 0.000
LOC_Os02g28020 Oryza sativa LOC_Os02g28020 N 0.000
LOC_Os03g21050 Oryza sativa LOC_Os03g21050 N 0.000
LOC_Os04g21180 Oryza sativa LOC_Os04g21180 N 0.000
LOC_Os05g19240 Oryza sativa LOC_Os05g19240 N 0.000
LOC_Os05g22590 Oryza sativa LOC_Os05g22590 N 0.000
LOC_Os05g24190 Oryza sativa LOC_Os05g24190 N 0.000
LOC_Os05g33340 Oryza sativa LOC_Os05g33340 N 0.000
LOC_Os05g51200 Oryza sativa LOC_Os05g51200 N 0.000
LOC_Os06g15460 Oryza sativa LOC_Os06g15460 N 0.000
LOC_Os06g20720 Oryza sativa LOC_Os06g20720 N 0.000
estExtDG_fgeneshEH_pg.C_710018 Emiliania huxleyi estExtDG_fgeneshEH_pg.C_710018 N 0.000