SB01G039540 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb01g039540 T45903_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g039540.1 RRM 140 210

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.127380 Cucumis sativus Cucsa.127380 I 0.817
B9HEV8_POPTR Populus trichocarpa POPTR_0007s12690 I 0.817
A9PI24_POPTR Populus trichocarpa POPTR_0005s12580 I 0.761
Glyma01g38120.1 Glycine max Glyma01g38120.1 N 0.831
Glyma11g07200.1 Glycine max Glyma11g07200.1 N 0.817
mgf003371m Mimulus guttatus mgf003371m N 0.714
GRMZM2G113592 Zea mays GRMZM2G113592 N 1.000
Medtr8g093540 Medicago truncatula Medtr8g093540 N 0.789
chr4.CM0165.550.nd Lotus japonicus chr4.CM0165.550.nd N 0.803
MDP0000261705 Malus x domestica MDP0000261705 N 0.750
MDP0000744216 Malus x domestica MDP0000744216 N 0.803
U1-70K Arabidopsis thaliana AT3G50670-TAIR-G N 0.775
29634.m002163 Ricinus communis 29634.m002163 N 0.831
SB01G026920 Sorghum bicolor Sb01g026920 N 0.958
LOC_Os10g02630 Oryza sativa LOC_Os10g02630 N 0.901
GSVIVG00018981001 Vitis vinifera GSVIVG00018981001 N 0.873
XM_002877713.1 Arabidopsis lyrata fgenesh2_kg.5__1406__AT3G50670.1 N 0.775
BRADI3G30430 Brachypodium distachyon BRADI3G30430 N 0.859
BRADI3G21360 Brachypodium distachyon BRADI3G21360 N 0.887
BGIOSIBCE031073 Oryza indica BGIOSIBCE031073 N 0.762
ppa004309m Prunus persica ppa004309m N 0.775