MDP0000744216 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000744216 T57717_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000744216 RRM 145 215

Links

Other RRM family RBPs
Other Malus x domestica RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa004309m Prunus persica ppa004309m N 0.958
MDP0000261705 Malus x domestica MDP0000261705 N 0.934
Glyma01g38120.1 Glycine max Glyma01g38120.1 N 0.887
29634.m002163 Ricinus communis 29634.m002163 N 0.873
GSVIVG00018981001 Vitis vinifera GSVIVG00018981001 N 0.873
Glyma11g07200.1 Glycine max Glyma11g07200.1 N 0.873
B9HEV8_POPTR Populus trichocarpa POPTR_0007s12690 I 0.873
Medtr8g093540 Medicago truncatula Medtr8g093540 N 0.873
Cucsa.127380 Cucumis sativus Cucsa.127380 I 0.859
chr4.CM0165.550.nd Lotus japonicus chr4.CM0165.550.nd N 0.859
BRADI3G21360 Brachypodium distachyon BRADI3G21360 N 0.845
LOC_Os10g02630 Oryza sativa LOC_Os10g02630 N 0.845
A9PI24_POPTR Populus trichocarpa POPTR_0005s12580 I 0.831
GRMZM2G113592 Zea mays GRMZM2G113592 N 0.803
XM_002877713.1 Arabidopsis lyrata fgenesh2_kg.5__1406__AT3G50670.1 N 0.803
U1-70K Arabidopsis thaliana AT3G50670-TAIR-G N 0.803
SB01G039540 Sorghum bicolor Sb01g039540 N 0.803
SB01G026920 Sorghum bicolor Sb01g026920 N 0.775
BRADI3G30430 Brachypodium distachyon BRADI3G30430 N 0.761
BGIOSIBCE031073 Oryza indica BGIOSIBCE031073 N 0.714
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.704
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.704
snrnp70 Danio rerio ENSDARG00000077126 I 0.704