CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LmjF25.1080
(
Leishmania major
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
LmjF25.1080
T47010_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LmjF25.1080
RRM
96
158
FGNLRNGTTEEDFLSLFNRDAIATHRLINQDGKSFAFVEFVSAQALTVALSLDQTFQRGRRMY
Links
Other
RRM
family RBPs
Other
Leishmania major
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BC1G_11734
Botrytis cinerea
BC1G_11734
N
0.000
GLRG_00003
Colletotrichum graminicola
GLRG_00003
N
0.000
MGG_04985
Magnaporthe oryzae
MGG_04985
N
0.000
SS1G_00079
Sclerotinia sclerotiorum
SS1G_00079
N
0.000
VDAG_05909
Verticillium dahliae
VDAG_05909
N
0.000
e_gw1.7.729.1
Trichoderma virens
e_gw1.7.729.1
N
0.000
e_gw1.9.204.1
Trichoderma reesei
e_gw1.9.204.1
N
0.000
estExt_fgenesh1_pg.C_40306
Myceliophthora thermophila
estExt_fgenesh1_pg.C_40306
N
0.000
estExt_Genewise1Plus.C_12215
Trichoderma atroviride
estExt_Genewise1Plus.C_12215
N
0.000