Cucsa.116130 (Cucumis sativus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Cucsa.116130 T49559_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.116130.1 RRM 9 78
Cucsa.116130.2 RRM 9 78
Cucsa.116130.3 RRM 9 78

Links

Other RRM family RBPs
Other Cucumis sativus RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT5G19960 Arabidopsis thaliana AT5G19960-TAIR-G N 0.700
MDP0000231316 Malus x domestica MDP0000231316 N 0.743
MDP0000128136 Malus x domestica MDP0000128136 N 0.757
Medtr8g118890 Medicago truncatula Medtr8g118890 N 0.729
Glyma17g12730.1 Glycine max Glyma17g12730.1 N 0.757
Glyma05g08160.1 Glycine max Glyma05g08160.1 N 0.771
cassava24191.valid.m1 Manihot esculenta cassava24191.valid.m1 N 0.786
29807.m000475 Ricinus communis 29807.m000475 N 0.714
GSVIVG00015463001 Vitis vinifera GSVIVG00015463001 N 0.771
ppa007582m Prunus persica ppa007582m N 0.786