estExt_fgenesh1_pg.C_sca_18_chr2_1_00570 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_sca_18_chr2_1_00570 T50675_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_sca_18_chr2_1_00570 RRM 218 288

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_087020 Penicillium marneffei PMAA_087020 N 0.817
estExt_fgenesh3_kg.C_30075 Neurospora discreta estExt_fgenesh3_kg.C_30075 N 0.930
estExt_fgenesh1_pm.C_chr_50176 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_50176 N 0.761
estExt_fgenesh1_kg.C_20030 Trichoderma atroviride estExt_fgenesh1_kg.C_20030 N 0.930
e_gw1.23.134.1 Cochliobolus heterostrophus C5 e_gw1.23.134.1 N 0.817
NCU08046 Neurospora crassa NCU08046 N 0.930
NFIA_085320 Neosartorya fischeri CADNFIAG00007580 N 0.831
ATEG_04425 Aspergillus terreus CADATEAG00007866 N 0.845
AO090011000648 Aspergillus oryzae CADAORAG00005372 N 0.845
ANIA_10765 Aspergillus nidulans CADANIAG00007002 N 0.831
An16g05260 Aspergillus niger CADANGAG00012995 N 0.845
AFUA_2G09870 Aspergillus fumigatus CADAFUAG00004789 N 0.831
estExt_Genewise1.C_150133 Neurospora tetrasperma estExt_Genewise1.C_150133 N 0.930
estExt_Genewise1Plus.C_11394 Thielavia terrestris estExt_Genewise1Plus.C_11394 N 0.901
Pc22g19890 Penicillium chrysogenum Pc22g19890 N 0.803
Pa_6_2610 Podospora anserina Pa_6_2610 N 0.944
GSTUMT00000237001 Tuber melanosporum GSTUMT00000237001 N 0.803
fgenesh1_pm.00168_#_326 Aspergillus carbonarius fgenesh1_pm.00168_#_326 N 0.817
estExt_Genewise1.C_32423 Cryphonectria parasitica estExt_Genewise1.C_32423 N 0.930
AB01496.1 Alternaria brassicicola AB01496.1 N 0.817
EAT79965.2 Phaeosphaeria nodorum EAT79965.2 N 0.817
fgenesh1_pg.C_scaffold_7000150 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_7000150 N 0.817
fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA Myceliophthora thermophila fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA N 0.873
estExt_GeneWisePlus.C_20435 Trichoderma reesei estExt_GeneWisePlus.C_20435 N 0.930
estExt_Genewise1Plus.C_11766 Trichoderma virens estExt_Genewise1Plus.C_11766 N 0.930
AFLA_044710 Aspergillus flavus CADAFLAG00005798 N 0.845
ACLA_068950 Aspergillus clavatus CADACLAG00006993 N 0.817
MCYG_04562 Microsporum canis MCYG_04562 N 0.859
HCAG_08183 Histoplasma capsulatum HCAG_08183 N 0.845
GLRG_08326 Colletotrichum graminicola GLRG_08326 N 0.958
FVEG_06043 Fusarium verticillioides FVEG_06043 N 0.986
FOXG_08630 Fusarium oxysporum FOXG_08630 N 0.986
FGSG_05065 Fusarium graminearum FGSG_05065 N 0.986
CPSG_09863 Coccidioides posadasii CPSG_09863 N 0.845
CIMG_07824 Coccidioides immitis CIMG_07824 N 0.845
CHGG_04600 Chaetomium globosum CHGG_04600 N 0.915
BDBG_06989 Blastomyces dermatitidis BDBG_06989 N 0.845
BC1G_11662 Botrytis cinerea BC1G_11662 N 0.887
MGG_07109 Magnaporthe oryzae MGG_07109 N 0.901
MGYG_08099 Microsporum gypseum MGYG_08099 N 0.873
VDBG_00824 Verticillium albo atrum VDBG_00824 N 0.958
VDAG_00435 Verticillium dahliae VDAG_00435 N 0.958
UREG_02154 Uncinocarpus reesii UREG_02154 N 0.845
TRV_03582 Trichophyton verrucosum TRV_03582 N 0.789
TESG_02700 Trichophyton tonsurans TESG_02700 N 0.803
TERG_03155 Trichophyton rubrum TERG_03155 N 0.803
TEQG_08157 Trichophyton equinum TEQG_08157 N 0.803
SS1G_09745 Sclerotinia sclerotiorum SS1G_09745 N 0.887
SNOG_12667 Stagonospora nodorum SNOG_12667 N 0.817
PTRG_11278 Pyrenophora tritici repentis PTRG_11278 N 0.817
PABG_02041 Paracoccidioides brasiliensis PABG_02041 N 0.845
ARB_05170 Arthroderma benhamiae ARB_05170 N 0.789