estExt_fgenesh1_pm.C_chr_50176 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_chr_50176 T50733_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_chr_50176 RRM 213 283

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_7000150 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_7000150 N 0.887
PTRG_11278 Pyrenophora tritici repentis PTRG_11278 N 0.831
AB01496.1 Alternaria brassicicola AB01496.1 N 0.831
GSTUMT00000237001 Tuber melanosporum GSTUMT00000237001 N 0.831
SNOG_12667 Stagonospora nodorum SNOG_12667 N 0.831
EAT79965.2 Phaeosphaeria nodorum EAT79965.2 N 0.831
e_gw1.23.134.1 Cochliobolus heterostrophus C5 e_gw1.23.134.1 N 0.831
An16g05260 Aspergillus niger CADANGAG00012995 N 0.775
AFLA_044710 Aspergillus flavus CADAFLAG00005798 N 0.775
AO090011000648 Aspergillus oryzae CADAORAG00005372 N 0.775
SS1G_09745 Sclerotinia sclerotiorum SS1G_09745 N 0.761
estExt_fgenesh1_pg.C_sca_18_chr2_1_00570 Nectria haematococca estExt_fgenesh1_pg.C_sca_18_chr2_1_00570 N 0.761
AFUA_2G09870 Aspergillus fumigatus CADAFUAG00004789 N 0.761
ATEG_04425 Aspergillus terreus CADATEAG00007866 N 0.761
NFIA_085320 Neosartorya fischeri CADNFIAG00007580 N 0.761
GLRG_08326 Colletotrichum graminicola GLRG_08326 N 0.761
fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA Myceliophthora thermophila fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA N 0.761
BC1G_11662 Botrytis cinerea BC1G_11662 N 0.761
Pc22g19890 Penicillium chrysogenum Pc22g19890 N 0.761
ACLA_068950 Aspergillus clavatus CADACLAG00006993 N 0.746
CPSG_09863 Coccidioides posadasii CPSG_09863 N 0.746
PMAA_087020 Penicillium marneffei PMAA_087020 N 0.746
fgenesh1_pm.00168_#_326 Aspergillus carbonarius fgenesh1_pm.00168_#_326 N 0.746
estExt_Genewise1.C_32423 Cryphonectria parasitica estExt_Genewise1.C_32423 N 0.746
CHGG_04600 Chaetomium globosum CHGG_04600 N 0.746
ANIA_10765 Aspergillus nidulans CADANIAG00007002 N 0.746
CIMG_07824 Coccidioides immitis CIMG_07824 N 0.746
UREG_02154 Uncinocarpus reesii UREG_02154 N 0.746
FOXG_08630 Fusarium oxysporum FOXG_08630 N 0.746
MCYG_04562 Microsporum canis MCYG_04562 N 0.746
FGSG_05065 Fusarium graminearum FGSG_05065 N 0.746
MGYG_08099 Microsporum gypseum MGYG_08099 N 0.746
FVEG_06043 Fusarium verticillioides FVEG_06043 N 0.746
estExt_GeneWisePlus.C_20435 Trichoderma reesei estExt_GeneWisePlus.C_20435 N 0.732
estExt_Genewise1Plus.C_11766 Trichoderma virens estExt_Genewise1Plus.C_11766 N 0.732
estExt_Genewise1Plus.C_11394 Thielavia terrestris estExt_Genewise1Plus.C_11394 N 0.732
estExt_Genewise1.C_150133 Neurospora tetrasperma estExt_Genewise1.C_150133 N 0.732
estExt_fgenesh1_kg.C_20030 Trichoderma atroviride estExt_fgenesh1_kg.C_20030 N 0.732
NCU08046 Neurospora crassa NCU08046 N 0.732
estExt_fgenesh3_kg.C_30075 Neurospora discreta estExt_fgenesh3_kg.C_30075 N 0.732
VDAG_00435 Verticillium dahliae VDAG_00435 N 0.732
BDBG_06989 Blastomyces dermatitidis BDBG_06989 N 0.732
PABG_02041 Paracoccidioides brasiliensis PABG_02041 N 0.732
VDBG_00824 Verticillium albo atrum VDBG_00824 N 0.732
HCAG_08183 Histoplasma capsulatum HCAG_08183 N 0.732
Pa_6_2610 Podospora anserina Pa_6_2610 N 0.732
MGG_07109 Magnaporthe oryzae MGG_07109 N 0.718