CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_04425
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00007866
T33771_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00007866
RRM
208
278
LRVTNVSELAEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADRTDAARACDKMDGFGYRHLILR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFLA_044710
Aspergillus flavus
CADAFLAG00005798
N
0.972
NFIA_085320
Neosartorya fischeri
CADNFIAG00007580
N
0.972
AFUA_2G09870
Aspergillus fumigatus
CADAFUAG00004789
N
0.972
An16g05260
Aspergillus niger
CADANGAG00012995
N
0.972
AO090011000648
Aspergillus oryzae
CADAORAG00005372
N
0.972
ANIA_10765
Aspergillus nidulans
CADANIAG00007002
N
0.972
PMAA_087020
Penicillium marneffei
PMAA_087020
N
0.944
ACLA_068950
Aspergillus clavatus
CADACLAG00006993
N
0.944
fgenesh1_pm.00168_#_326
Aspergillus carbonarius
fgenesh1_pm.00168_#_326
N
0.944
MGYG_08099
Microsporum gypseum
MGYG_08099
N
0.915
Pc22g19890
Penicillium chrysogenum
Pc22g19890
N
0.901
MCYG_04562
Microsporum canis
MCYG_04562
N
0.887
BDBG_06989
Blastomyces dermatitidis
BDBG_06989
N
0.873
PABG_02041
Paracoccidioides brasiliensis
PABG_02041
N
0.873
UREG_02154
Uncinocarpus reesii
UREG_02154
N
0.873
HCAG_08183
Histoplasma capsulatum
HCAG_08183
N
0.873
CPSG_09863
Coccidioides posadasii
CPSG_09863
N
0.873
CIMG_07824
Coccidioides immitis
CIMG_07824
N
0.873
estExt_fgenesh1_pg.C_sca_18_chr2_1_00570
Nectria haematococca
estExt_fgenesh1_pg.C_sca_18_chr2_1_00570
N
0.845
FVEG_06043
Fusarium verticillioides
FVEG_06043
N
0.831
estExt_Genewise1.C_150133
Neurospora tetrasperma
estExt_Genewise1.C_150133
N
0.831
FGSG_05065
Fusarium graminearum
FGSG_05065
N
0.831
estExt_Genewise1Plus.C_11394
Thielavia terrestris
estExt_Genewise1Plus.C_11394
N
0.831
estExt_fgenesh3_kg.C_30075
Neurospora discreta
estExt_fgenesh3_kg.C_30075
N
0.831
estExt_Genewise1.C_32423
Cryphonectria parasitica
estExt_Genewise1.C_32423
N
0.831
Pa_6_2610
Podospora anserina
Pa_6_2610
N
0.831
FOXG_08630
Fusarium oxysporum
FOXG_08630
N
0.831
NCU08046
Neurospora crassa
NCU08046
N
0.831
VDBG_00824
Verticillium albo atrum
VDBG_00824
N
0.817
estExt_fgenesh1_kg.C_20030
Trichoderma atroviride
estExt_fgenesh1_kg.C_20030
N
0.817
estExt_GeneWisePlus.C_20435
Trichoderma reesei
estExt_GeneWisePlus.C_20435
N
0.817
VDAG_00435
Verticillium dahliae
VDAG_00435
N
0.817
estExt_Genewise1Plus.C_11766
Trichoderma virens
estExt_Genewise1Plus.C_11766
N
0.817
GLRG_08326
Colletotrichum graminicola
GLRG_08326
N
0.817
CHGG_04600
Chaetomium globosum
CHGG_04600
N
0.817
fgenesh1_pg.C_scaffold_7000150
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_7000150
N
0.803
TESG_02700
Trichophyton tonsurans
TESG_02700
N
0.803
BC1G_11662
Botrytis cinerea
BC1G_11662
N
0.803
ARB_05170
Arthroderma benhamiae
ARB_05170
N
0.803
TERG_03155
Trichophyton rubrum
TERG_03155
N
0.803
TRV_03582
Trichophyton verrucosum
TRV_03582
N
0.803
SS1G_09745
Sclerotinia sclerotiorum
SS1G_09745
N
0.803
TEQG_08157
Trichophyton equinum
TEQG_08157
N
0.803
fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA
Myceliophthora thermophila
fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA
N
0.803
GSTUMT00000237001
Tuber melanosporum
GSTUMT00000237001
N
0.789
EAT79965.2
Phaeosphaeria nodorum
EAT79965.2
N
0.789
SNOG_12667
Stagonospora nodorum
SNOG_12667
N
0.789
MGG_07109
Magnaporthe oryzae
MGG_07109
N
0.789
e_gw1.23.134.1
Cochliobolus heterostrophus C5
e_gw1.23.134.1
N
0.775
AB01496.1
Alternaria brassicicola
AB01496.1
N
0.775
PTRG_11278
Pyrenophora tritici repentis
PTRG_11278
N
0.775
estExt_fgenesh1_pm.C_chr_50176
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50176
N
0.761