CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_08099
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_08099
T29852_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_08099T0
RRM
212
282
LRVTNVSELAEEQELRDMFERFGRVTRVFLAKDRETNMAKGFAFISFADRSDAARACDKMDGFGYRHLILR
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MCYG_04562
Microsporum canis
MCYG_04562
N
0.972
BDBG_06989
Blastomyces dermatitidis
BDBG_06989
N
0.958
PABG_02041
Paracoccidioides brasiliensis
PABG_02041
N
0.958
HCAG_08183
Histoplasma capsulatum
HCAG_08183
N
0.958
ANIA_10765
Aspergillus nidulans
CADANIAG00007002
N
0.944
An16g05260
Aspergillus niger
CADANGAG00012995
N
0.915
ATEG_04425
Aspergillus terreus
CADATEAG00007866
N
0.915
AFLA_044710
Aspergillus flavus
CADAFLAG00005798
N
0.915
AO090011000648
Aspergillus oryzae
CADAORAG00005372
N
0.915
PMAA_087020
Penicillium marneffei
PMAA_087020
N
0.915
CPSG_09863
Coccidioides posadasii
CPSG_09863
N
0.915
UREG_02154
Uncinocarpus reesii
UREG_02154
N
0.915
CIMG_07824
Coccidioides immitis
CIMG_07824
N
0.915
ACLA_068950
Aspergillus clavatus
CADACLAG00006993
N
0.901
fgenesh1_pm.00168_#_326
Aspergillus carbonarius
fgenesh1_pm.00168_#_326
N
0.901
NFIA_085320
Neosartorya fischeri
CADNFIAG00007580
N
0.901
AFUA_2G09870
Aspergillus fumigatus
CADAFUAG00004789
N
0.901
estExt_GeneWisePlus.C_20435
Trichoderma reesei
estExt_GeneWisePlus.C_20435
N
0.887
FVEG_06043
Fusarium verticillioides
FVEG_06043
N
0.887
FOXG_08630
Fusarium oxysporum
FOXG_08630
N
0.887
ARB_05170
Arthroderma benhamiae
ARB_05170
N
0.887
estExt_fgenesh3_kg.C_30075
Neurospora discreta
estExt_fgenesh3_kg.C_30075
N
0.887
estExt_Genewise1.C_150133
Neurospora tetrasperma
estExt_Genewise1.C_150133
N
0.887
NCU08046
Neurospora crassa
NCU08046
N
0.887
TERG_03155
Trichophyton rubrum
TERG_03155
N
0.887
TESG_02700
Trichophyton tonsurans
TESG_02700
N
0.887
TRV_03582
Trichophyton verrucosum
TRV_03582
N
0.887
VDAG_00435
Verticillium dahliae
VDAG_00435
N
0.887
VDBG_00824
Verticillium albo atrum
VDBG_00824
N
0.887
TEQG_08157
Trichophyton equinum
TEQG_08157
N
0.887
CHGG_04600
Chaetomium globosum
CHGG_04600
N
0.873
FGSG_05065
Fusarium graminearum
FGSG_05065
N
0.873
estExt_fgenesh1_kg.C_20030
Trichoderma atroviride
estExt_fgenesh1_kg.C_20030
N
0.873
estExt_Genewise1Plus.C_11766
Trichoderma virens
estExt_Genewise1Plus.C_11766
N
0.873
estExt_fgenesh1_pg.C_sca_18_chr2_1_00570
Nectria haematococca
estExt_fgenesh1_pg.C_sca_18_chr2_1_00570
N
0.873
estExt_Genewise1Plus.C_11394
Thielavia terrestris
estExt_Genewise1Plus.C_11394
N
0.873
BC1G_11662
Botrytis cinerea
BC1G_11662
N
0.859
Pa_6_2610
Podospora anserina
Pa_6_2610
N
0.859
estExt_Genewise1.C_32423
Cryphonectria parasitica
estExt_Genewise1.C_32423
N
0.859
GLRG_08326
Colletotrichum graminicola
GLRG_08326
N
0.859
SS1G_09745
Sclerotinia sclerotiorum
SS1G_09745
N
0.859
Pc22g19890
Penicillium chrysogenum
Pc22g19890
N
0.845
fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA
Myceliophthora thermophila
fgenesh1_kg.1_#_222_#_2209_1_CCWO_CCWP_EXTA
N
0.845
MGG_07109
Magnaporthe oryzae
MGG_07109
N
0.831
e_gw1.23.134.1
Cochliobolus heterostrophus C5
e_gw1.23.134.1
N
0.817
PTRG_11278
Pyrenophora tritici repentis
PTRG_11278
N
0.817
fgenesh1_pg.C_scaffold_7000150
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_7000150
N
0.817
GSTUMT00000237001
Tuber melanosporum
GSTUMT00000237001
N
0.817
AB01496.1
Alternaria brassicicola
AB01496.1
N
0.817
SNOG_12667
Stagonospora nodorum
SNOG_12667
N
0.803
EAT79965.2
Phaeosphaeria nodorum
EAT79965.2
N
0.803
estExt_fgenesh1_pm.C_chr_50176
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50176
N
0.746