SOCG_02788 (Schizosaccharomyces octosporus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SOCG_02788 T01586_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_02788T0 CCCH ZF 41 65
SOCG_02788T0 CCCH ZF 68 92

Links

Other CCCH ZF family RBPs
Other Schizosaccharomyces octosporus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.700
SJAG_01535 Schizosaccharomyces japonicus SJAG_01535 N 0.740
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.820
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.860
SPOG_02388 Schizosaccharomyces cryophilus SPOG_02388 N 0.960