SPCC1739.01 (Schizosaccharomyces pombe)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SPCC1739.01 T04160_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPCC1739.01-1 CCCH ZF 43 67
SPCC1739.01-1 CCCH ZF 70 92

Links

Other CCCH ZF family RBPs
Other Schizosaccharomyces pombe RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_02388 Schizosaccharomyces cryophilus SPOG_02388 N 0.880
SOCG_02788 Schizosaccharomyces octosporus SOCG_02788 N 0.860
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.820
SJAG_01535 Schizosaccharomyces japonicus SJAG_01535 N 0.776
cps3 Schizosaccharomyces pombe SPAC3A11.02 N 0.750
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.729
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.729
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.729
SOCG_00453 Schizosaccharomyces octosporus SOCG_00453 N 0.708
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.708
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.708
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.700
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.700
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.700
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.700
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.700