SJAG_01535 (Schizosaccharomyces japonicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SJAG_01535 T01563_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_01535T0 CCCH ZF 37 61
SJAG_01535T0 CCCH ZF 66 89

Links

Other CCCH ZF family RBPs
Other Schizosaccharomyces japonicus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cps3 Schizosaccharomyces pombe SPAC3A11.02 N 0.857
SOCG_00453 Schizosaccharomyces octosporus SOCG_00453 N 0.837
SPOG_02388 Schizosaccharomyces cryophilus SPOG_02388 N 0.780
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.776
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.760
SOCG_02788 Schizosaccharomyces octosporus SOCG_02788 N 0.740
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.720
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.720
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.720
NCU05007 Neurospora crassa NCU05007 N 0.720
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.714
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.700
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.700
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.700
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.700
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.700
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.700
estExt_fgeneshPB_pg.C_150161 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_150161 N 0.700
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.700