CABZ01077452.1 (Danio rerio)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDARG00000075165 T02466_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000103811 CCCH ZF 221 245
ENSDARP00000103811 CCCH ZF 250 275
ENSDARP00000103811 CCCH ZF 279 302

Links

Other CCCH ZF family RBPs
Other Danio rerio RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MKC0_CALJA Callithrix jacchus ENSCJAG00000016492 N 0.727
Ame_R012775 Ailuropoda melanoleuca Ame_R012775 N 0.779
ENSCPOG00000008258 Cavia porcellus ENSCPOG00000008258 N 0.701
ENSGACG00000005343 Gasterosteus aculeatus ENSGACG00000005343 N 0.853
ENSPPYG00000012165 Pongo pygmaeus ENSPPYG00000012165 N 0.727
ENSTNIG00000016608 Tetraodon nigroviridis ENSTNIG00000016608 N 0.853
ENSTRUG00000012901 Takifugu rubripes ENSTRUG00000012901 N 0.867
Q17QY2_BOVIN Bos taurus ENSBTAG00000015965 N 0.740
ZC3H4 Oryzias latipes ENSORLG00000011179 N 0.867
Zc3h6 Rattus norvegicus ENSRNOG00000026277 N 0.737
ZC3H6 Pteropus vampyrus ENSPVAG00000013728 N 0.756
ZC3H6 Pan troglodytes ENSPTRG00000012363 N 0.769
ZC3H6 Ochotona princeps ENSOPRG00000012717 N 0.792
ZC3H6 Oryctolagus cuniculus ENSOCUG00000011125 N 0.779
ZC3H6 Otolemur garnettii ENSOGAG00000002556 N 0.731
ZC3H6 Sus scrofa ENSSSCG00000008096 N 0.769
ZC3H6 Sorex araneus ENSSARG00000001035 N 0.744
ZC3H6 Spermophilus tridecemlineatus ENSSTOG00000008120 N 0.731
ZC3H6 Tupaia belangeri ENSTBEG00000016232 N 0.731
ZC3H6 Callithrix jacchus ENSCJAG00000016479 N 0.769
ZC3H6 Tarsius syrichta ENSTSYG00000006672 N 0.769
ZC3H6 Tursiops truncatus ENSTTRG00000013154 N 0.769
ZC3H6 Vicugna pacos ENSVPAG00000005912 N 0.769
zc3h6 Xenopus tropicalis ENSXETG00000013762 N 0.782
ZC3H6 Ornithorhynchus anatinus ENSOANG00000012054 N 0.795
Zc3h6 Mus musculus ENSMUSG00000042851 N 0.750
ZC3H6 Anolis carolinensis ENSACAG00000005815 N 0.731
ZC3H6 Bos taurus ENSBTAG00000020646 N 0.769
ZC3H6 Canis familiaris ENSCAFG00000007160 N 0.769
ZC3H6 Dasypus novemcinctus ENSDNOG00000000253 N 0.789
Zc3h6 Dipodomys ordii ENSDORG00000013967 N 0.756
ZC3H6 Homo sapiens ENSG00000188177 N 0.769
ZC3H6 Gallus gallus ENSGALG00000008269 N 0.769
ZC3H6 Gorilla gorilla ENSGGOG00000001665 N 0.769
ZC3H6 Meleagris gallopavo ENSMGAG00000003025 N 0.769
ZC3H6 Myotis lucifugus ENSMLUG00000004896 N 0.705
ZC3H6 Procavia capensis ENSPCAG00000015468 N 0.789
ZC3H6 Loxodonta africana ENSLAFG00000001151 N 0.782
ZC3H6 Macaca mulatta ENSMMUG00000016430 N 0.731
ZC3H8 Canis familiaris ENSCAFG00000007155 N 0.727
ZC3H8 Vicugna pacos ENSVPAG00000005911 N 0.750
ZC3H8 Oryctolagus cuniculus ENSOCUG00000011253 N 0.714
ZC3H8 Choloepus hoffmanni ENSCHOG00000010391 N 0.727
ZC3H8 Dasypus novemcinctus ENSDNOG00000018056 N 0.727
ZC3H8 Taeniopygia guttata ENSTGUG00000007468 N 0.766
ZC3H8 Pan troglodytes ENSPTRG00000012362 N 0.727
ZC3H8 Erinaceus europaeus ENSEEUG00000006984 N 0.724
ZC3H8 Sus scrofa ENSSSCG00000008099 N 0.740
ZC3H8 Homo sapiens ENSG00000144161 N 0.727
ZC3H8 Loxodonta africana ENSLAFG00000004675 N 0.727
Zc3h8 Rattus norvegicus ENSRNOG00000017647 N 0.714
ZC3H8 Gorilla gorilla ENSGGOG00000009004 N 0.727
Zc3h8 Mus musculus ENSMUSG00000027387 N 0.701