MBNL2 (Monodelphis domestica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSMODG00000008566 T02954_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.871
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.871
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000010651 CCCH ZF 16 40
ENSMODP00000010651 CCCH ZF 57 72
ENSMODP00000010651 CCCH ZF 177 203
ENSMODP00000010651 CCCH ZF 215 237
ENSMODP00000010652 CCCH ZF 16 40
ENSMODP00000010652 CCCH ZF 57 72
ENSMODP00000010652 CCCH ZF 177 203
ENSMODP00000010652 CCCH ZF 215 237
ENSMODP00000010653 CCCH ZF 16 40
ENSMODP00000010653 CCCH ZF 57 72
ENSMODP00000010653 CCCH ZF 177 203
ENSMODP00000010653 CCCH ZF 215 237
ENSMODP00000010656 CCCH ZF 16 40
ENSMODP00000010656 CCCH ZF 57 72
ENSMODP00000010656 CCCH ZF 177 203
ENSMODP00000010656 CCCH ZF 215 237

Links

Other CCCH ZF family RBPs
Other Monodelphis domestica RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL009235 Aedes aegypti AAEL009235 N 0.000
AGAP005641 Anopheles gambiae AGAP005641 N 0.000
CG9705 Drosophila melanogaster FBgn0036661 N 0.000
CPIJ008535 Culex quinquefasciatus CPIJ008535 N 0.000
CpipJ_CPIJ008535 Culex pipiens CpipJ_CPIJ008535 N 0.000
GA21978-RA Drosophila pseudoobscura FBgn0081963 N 0.000
GD14664 Drosophila simulans FBgn0186342 N 0.000
GE19874 Drosophila yakuba FBgn0237204 N 0.000
GF23931 Drosophila ananassae FBgn0100925 N 0.000
GG13577 Drosophila erecta FBgn0105847 N 0.000
GH16224 Drosophila grimshawi FBgn0123695 N 0.000
GI13370 Drosophila mojavensis FBgn0136127 N 0.000
GJ13199 Drosophila virilis FBgn0200425 N 0.000
GK16809 Drosophila willistoni FBgn0218809 N 0.000
GM25657 Drosophila sechellia FBgn0180514 N 0.000