A7TDY4_VANPO (Vanderwaltozyma polyspora)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 A7TDY4_VANPO T05914_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
A7TDY4 CCCH ZF 29 57
A7TDY4 CCCH ZF 63 86
A7TDY4 CCCH ZF 89 115
A7TDY4 CCCH ZF 119 138
A7TDY4 CCCH ZF 144 167

Links

Other CCCH ZF family RBPs
Other Vanderwaltozyma polyspora RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
22646_YPR107C Saccharomyces mikatae 22646_YPR107C N 0.000
23053_YPR107C Saccharomyces paradoxus 23053_YPR107C N 0.000
25937_YPR107C Saccharomyces bayanus 25937_YPR107C N 0.000
KLTH0D02948g Kluyveromyces thermotolerans KLTH0D02948g N 0.000
Kwal_7234 Kluyveromyces waltii Kwal_7234 N 0.000
SAKL0B09372g Lachancea kluyveri SAKL0B09372g N 0.000
Skud_Contig1473.3 Saccharomyces kudriavzevii Skud_Contig1473.3 N 0.000
YTH1 Ashbya gossypii YTH1 N 0.000
YTH1 Saccharomyces cerevisiae YPR107C N 0.000
ZYRO0C17776g Zygosaccharomyces rouxii ZYRO0C17776g N 0.701