ZYRO0C17776g (Zygosaccharomyces rouxii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ZYRO0C17776g T06683_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ZYRO0C17776g CCCH ZF 29 58
ZYRO0C17776g CCCH ZF 64 87
ZYRO0C17776g CCCH ZF 90 116
ZYRO0C17776g CCCH ZF 119 139
ZYRO0C17776g CCCH ZF 144 161

Links

Other CCCH ZF family RBPs
Other Zygosaccharomyces rouxii RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SAKL0B09372g Lachancea kluyveri SAKL0B09372g N 0.833
KLTH0D02948g Kluyveromyces thermotolerans KLTH0D02948g N 0.826
CAGL0G01694g Candida glabrata CAGL0G01694g N 0.808
Kwal_7234 Kluyveromyces waltii Kwal_7234 N 0.784
YTH1 Saccharomyces cerevisiae YPR107C N 0.770
25937_YPR107C Saccharomyces bayanus 25937_YPR107C N 0.770
Skud_Contig1473.3 Saccharomyces kudriavzevii Skud_Contig1473.3 N 0.770
23053_YPR107C Saccharomyces paradoxus 23053_YPR107C N 0.770
22646_YPR107C Saccharomyces mikatae 22646_YPR107C N 0.770
KLLA0F08129g Kluyveromyces lactis KLLA0F08129g N 0.714
gww1.4.1.1582.1 Pichia stipitis gww1.4.1.1582.1 N 0.709
YTH1 Ashbya gossypii YTH1 N 0.705
A7TDY4_VANPO Vanderwaltozyma polyspora A7TDY4_VANPO N 0.701