GSVIVG00009823001 (Vitis vinifera)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 GSVIVG00009823001 T10650_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00009823001 CCHC ZF 49 66
GSVIVT00009823001 CCHC ZF 68 85
GSVIVT00009823001 CCHC ZF 87 104
GSVIVT00009823001 CCHC ZF 106 123
GSVIVT00009823001 CCHC ZF 132 149
GSVIVT00009823001 CCHC ZF 151 168
GSVIVT00009823001 CCHC ZF 170 187
GSVIVT00009823001 CCHC ZF 206 222
GSVIVT00009823001 CCHC ZF 226 243

Links

Other CCHC ZF family RBPs
Other Vitis vinifera RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2160_YCL037C Saccharomyces mikatae 2160_YCL037C N 0.000
2293_YCL037C Saccharomyces paradoxus 2293_YCL037C N 0.000
2468_Multiple Saccharomyces bayanus 2468_Multiple N 0.000
A7TFA8_VANPO Vanderwaltozyma polyspora A7TFA8_VANPO N 0.000
A7TFF0_VANPO Vanderwaltozyma polyspora A7TFF0_VANPO N 0.000
KLTH0F01210g Kluyveromyces thermotolerans KLTH0F01210g N 0.000
SAKL0C01254g Lachancea kluyveri SAKL0C01254g N 0.000
Scas_Contig579.3 Saccharomyces castellii Scas_Contig579.3 N 0.000
Skud_Contig2072.8 Saccharomyces kudriavzevii Skud_Contig2072.8 N 0.000
ZYRO0F17798g Zygosaccharomyces rouxii ZYRO0F17798g N 0.000