LOC_Os06g18090 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g18090 T11597_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g18090.1 CCHC ZF 291 308

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

306 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.000
estExt_fgenesh1_pg.C_30620 Cryphonectria parasitica estExt_fgenesh1_pg.C_30620 N 0.000
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.000
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 0.000
fgenesh1_pm.1_#_413 Myceliophthora thermophila fgenesh1_pm.1_#_413 N 0.000
fgenesh1_pm.C_scaffold_4000255 Neurospora tetrasperma fgenesh1_pm.C_scaffold_4000255 N 0.000
fgenesh1_pm.sca_18_chr2_1_0000466 Nectria haematococca fgenesh1_pm.sca_18_chr2_1_0000466 N 0.000
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.000
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.000
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.000
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.000
NCU09742 Neurospora crassa NCU09742 N 0.000
Pa_6_3170 Podospora anserina Pa_6_3170 N 0.000
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.000