LOC_Os09g21640 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g21640 T12147_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g21640.1 CCHC ZF 432 449

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm44335 Apis mellifera amel4_ncbi_hmm44335 N 0.000
BGIBMGA006328 Bombyx mori BGIBMGA006328 N 0.000
CPIJ002709 Culex quinquefasciatus CPIJ002709 N 0.000
CpipJ_CPIJ002709 Culex pipiens CpipJ_CPIJ002709 N 0.000
DGIL_AUG5s5041g4t3 Acyrtosiphon pisum DGIL_AUG5s5041g4t3 N 0.000
GA27251-RA Drosophila pseudoobscura FBgn0248619 N 0.000
GE23462 Drosophila yakuba FBgn0240644 N 0.000
GF16118 Drosophila ananassae FBgn0093140 N 0.000
GG11270 Drosophila erecta FBgn0103571 N 0.000
GH18670 Drosophila grimshawi FBgn0126137 N 0.000
GJ10528 Drosophila virilis FBgn0197808 N 0.000
GK11389 Drosophila willistoni FBgn0213400 N 0.000
mask Drosophila melanogaster FBgn0043884 N 0.000
PHUM473040 Pediculus humanus PHUM473040 N 0.000