Aqu1.216487 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.216487 T13288_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.216487 CCHC ZF 6 23

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30217.m000250 Ricinus communis 30217.m000250 N 0.000
AT3G25150 Arabidopsis thaliana AT3G25150-TAIR-G N 0.000
B9GQM2_POPTR Populus trichocarpa POPTR_0002s24800 N 0.000
cassava38071.valid.m1 Manihot esculenta cassava38071.valid.m1 N 0.000
cassava6829.valid.m1 Manihot esculenta cassava6829.valid.m1 N 0.000
cassava6830.valid.m1 Manihot esculenta cassava6830.valid.m1 N 0.000
cassava6831.valid.m1 Manihot esculenta cassava6831.valid.m1 N 0.000
cassava6832.valid.m1 Manihot esculenta cassava6832.valid.m1 N 0.000
Glyma08g46190.1 Glycine max Glyma08g46190.1 N 0.000
Glyma18g33150.1 Glycine max Glyma18g33150.1 N 0.000
GSVIVG00003923001 Vitis vinifera GSVIVG00003923001 N 0.000
LjT09O11.20.nd Lotus japonicus LjT09O11.20.nd N 0.000
PK18139.1 Cannabis sativa PK18139.1 N 0.000
scaffold_2600002.1 Arabidopsis lyrata scaffold_2600002.1 N 0.000