LjT09O11.20.nd (Lotus japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LjT09O11.20.nd T57271_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjT09O11.20.nd RRM 334 401

Links

Other RRM family RBPs
Other Lotus japonicus RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma18g33150.1 Glycine max Glyma18g33150.1 N 0.868
Glyma08g46190.1 Glycine max Glyma08g46190.1 N 0.809
cassava6832.valid.m1 Manihot esculenta cassava6832.valid.m1 N 0.779
cassava6833.valid.m1 Manihot esculenta cassava6833.valid.m1 N 0.779
cassava6831.valid.m1 Manihot esculenta cassava6831.valid.m1 N 0.779
cassava6830.valid.m1 Manihot esculenta cassava6830.valid.m1 N 0.779
cassava6829.valid.m1 Manihot esculenta cassava6829.valid.m1 N 0.779
30217.m000250 Ricinus communis 30217.m000250 N 0.765
PK18139.1 Cannabis sativa PK18139.1 N 0.750
B9GQM2_POPTR Populus trichocarpa POPTR_0002s24800 N 0.750
GSVIVG00003923001 Vitis vinifera GSVIVG00003923001 N 0.739
cassava38071.valid.m1 Manihot esculenta cassava38071.valid.m1 N 0.735
Medtr7g062040 Medicago truncatula Medtr7g062040 N 0.735
chr1.LjT36I17.190.nd Lotus japonicus chr1.LjT36I17.190.nd N 0.721