PK18139.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK18139.1 T31724_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK18139.1 RRM 328 395

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma18g33150.1 Glycine max Glyma18g33150.1 N 0.779
B9GQM2_POPTR Populus trichocarpa POPTR_0002s24800 N 0.779
30217.m000250 Ricinus communis 30217.m000250 N 0.765
AT3G25150 Arabidopsis thaliana AT3G25150-TAIR-G N 0.765
GSVIVG00003923001 Vitis vinifera GSVIVG00003923001 N 0.754
scaffold_2600002.1 Arabidopsis lyrata scaffold_2600002.1 N 0.750
LjT09O11.20.nd Lotus japonicus LjT09O11.20.nd N 0.750
Glyma08g46190.1 Glycine max Glyma08g46190.1 N 0.735
cassava6833.valid.m1 Manihot esculenta cassava6833.valid.m1 N 0.721
cassava6832.valid.m1 Manihot esculenta cassava6832.valid.m1 N 0.721
cassava6829.valid.m1 Manihot esculenta cassava6829.valid.m1 N 0.721
cassava6831.valid.m1 Manihot esculenta cassava6831.valid.m1 N 0.721
cassava6830.valid.m1 Manihot esculenta cassava6830.valid.m1 N 0.721
Medtr7g062040 Medicago truncatula Medtr7g062040 N 0.706
cassava38071.valid.m1 Manihot esculenta cassava38071.valid.m1 N 0.706
SB04G020120 Sorghum bicolor Sb04g020120 N 0.700