cassava6830.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava6830.valid.m1 T49452_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava6830.valid.m1 RRM 303 370

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava6831.valid.m1 Manihot esculenta cassava6831.valid.m1 N 1.000
cassava6829.valid.m1 Manihot esculenta cassava6829.valid.m1 N 1.000
cassava6833.valid.m1 Manihot esculenta cassava6833.valid.m1 N 1.000
cassava6832.valid.m1 Manihot esculenta cassava6832.valid.m1 N 1.000
cassava38071.valid.m1 Manihot esculenta cassava38071.valid.m1 N 0.897
30217.m000250 Ricinus communis 30217.m000250 N 0.897
B9GQM2_POPTR Populus trichocarpa POPTR_0002s24800 N 0.838
Glyma18g33150.1 Glycine max Glyma18g33150.1 N 0.809
LjT09O11.20.nd Lotus japonicus LjT09O11.20.nd N 0.779
Glyma08g46190.1 Glycine max Glyma08g46190.1 N 0.779
AT3G25150 Arabidopsis thaliana AT3G25150-TAIR-G N 0.735
GSVIVG00003923001 Vitis vinifera GSVIVG00003923001 N 0.725
PK18139.1 Cannabis sativa PK18139.1 N 0.721
scaffold_2600002.1 Arabidopsis lyrata scaffold_2600002.1 N 0.721