Glyma10g12900.1 (Glycine max)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Glyma10g12900.1 T14506_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma10g12900.1 CCHC ZF 253 270

Links

Other CCHC ZF family RBPs
Other Glycine max RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_07806 Blastomyces dermatitidis BDBG_07806 I 0.000
CHGG_04587 Chaetomium globosum CHGG_04587 I 0.000
estExt_fgenesh1_pg.C_sca_20_chr6_4_00002 Nectria haematococca estExt_fgenesh1_pg.C_sca_20_chr6_4_00002 I 0.000
estExt_fgenesh5_pg.C_20604 Trichoderma reesei estExt_fgenesh5_pg.C_20604 I 0.000
estExt_Genewise1Plus.C_11424 Thielavia terrestris estExt_Genewise1Plus.C_11424 I 0.000
e_gw1.3.979.1 Cryphonectria parasitica e_gw1.3.979.1 I 0.000
fgenesh1_pg.C_scaffold_8000502 Trichoderma virens fgenesh1_pg.C_scaffold_8000502 I 0.000
FVEG_10477 Fusarium verticillioides FVEG_10477 N 0.000
GLRG_08280 Colletotrichum graminicola GLRG_08280 I 0.000
HCAG_02639 Histoplasma capsulatum HCAG_02639 N 0.000
MGG_07085 Magnaporthe oryzae MGG_07085 I 0.000
NCU08034 Neurospora crassa NCU08034 D 0.000
NFIA_075370 Neosartorya fischeri CADNFIAG00007887 N 0.000
PABG_04932 Paracoccidioides brasiliensis PABG_04932 N 0.000
Pa_6_2170 Podospora anserina Pa_6_2170 I 0.000
scaffold_15-snap.81.1 Neurospora tetrasperma scaffold_15-snap.81.1 I 0.000
VDAG_10424 Verticillium dahliae VDAG_10424 I 0.000