GLRG_08280 (Colletotrichum graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GLRG_08280 T29429_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCU08034
M186_0.6 		Neurospora crassa WGCACA RNAcompete
Ray et al.(2013)
RNCMPT00209 		0.754
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_08280T0 RRM 10 81
GLRG_08280T0 RRM 174 238

Links

Other RRM family RBPs
Other Colletotrichum graminicola RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_10424 Verticillium dahliae VDAG_10424 I 0.803
estExt_Genewise1Plus.C_11381 Myceliophthora thermophila estExt_Genewise1Plus.C_11381 I 0.788
estExt_Genewise1Plus.C_11424 Thielavia terrestris estExt_Genewise1Plus.C_11424 I 0.788
Pa_6_2170 Podospora anserina Pa_6_2170 I 0.781
estExt_fgenesh1_pg.C_sca_20_chr6_4_00002 Nectria haematococca estExt_fgenesh1_pg.C_sca_20_chr6_4_00002 I 0.768
MGG_07085 Magnaporthe oryzae MGG_07085 I 0.766
CHGG_04587 Chaetomium globosum CHGG_04587 I 0.759
estExt_fgenesh5_pg.C_20604 Trichoderma reesei estExt_fgenesh5_pg.C_20604 I 0.754
scaffold_15-snap.81.1 Neurospora tetrasperma scaffold_15-snap.81.1 I 0.754
NCU08034 Neurospora crassa NCU08034 D 0.754
e_gw1.3.979.1 Cryphonectria parasitica e_gw1.3.979.1 I 0.734
FVEG_10477 Fusarium verticillioides FVEG_10477 N 0.732
FGSG_04286 Fusarium graminearum FGSG_04286 N 0.725
fgenesh1_pg.C_scaffold_8000502 Trichoderma virens fgenesh1_pg.C_scaffold_8000502 I 0.725
NFIA_075370 Neosartorya fischeri CADNFIAG00007887 N 0.708