CRE03839 (Caenorhabditis remanei)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 CRE03839 T16745_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CRE03839 CSD 61 132

Links

Other CSD family RBPs
Other Caenorhabditis remanei RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
193935 Helobdella robusta 193935 N 0.000
AAH73220 Xenopus laevis AAH73220 N 0.000
AAI06269 Xenopus laevis AAI06269 N 0.000
AAI55956 Xenopus laevis AAI55956 N 0.000
AAI69358 Xenopus laevis AAI69358 N 0.000
AAI69386 Xenopus laevis AAI69386 N 0.000
AGAP010288 Anopheles gambiae AGAP010288 N 0.000
amel4_ncbi_hmm6926 Apis mellifera amel4_ncbi_hmm6926 N 0.000
amel4_ncbi_hmm6926 Tribolium castaneum amel4_ncbi_hmm6926 N 0.000
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.000
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.000
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.000
ENSMLUG00000015085 Myotis lucifugus ENSMLUG00000015085 N 0.000
ENSMUSG00000055763 Mus musculus ENSMUSG00000055763 N 0.000
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.000
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.000
estExt_fgenesh1_pg.C_1000062 Nematostella vectensis estExt_fgenesh1_pg.C_1000062 N 0.000
e_gw1.39.163.1 Capitella teleta e_gw1.39.163.1 N 0.000
e_gw1.50.264.1 Lottia gigantea e_gw1.50.264.1 N 0.000
fgenesh1_pg.C_scaffold_97000016 Daphnia pulex fgenesh1_pg.C_scaffold_97000016 N 0.000
fgenesh2_pg.scaffold_670000003 Branchiostoma floridae fgenesh2_pg.scaffold_670000003 N 0.000
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.000
GD11693 Drosophila simulans FBgn0183433 N 0.000
GE14012 Drosophila yakuba FBgn0231642 N 0.000
GF11639 Drosophila ananassae FBgn0088679 N 0.000
GG22783 Drosophila erecta FBgn0114948 N 0.000
GH19772 Drosophila grimshawi FBgn0127236 N 0.000
GI20311 Drosophila mojavensis FBgn0143047 N 0.000
GJ22038 Drosophila virilis FBgn0209152 N 0.000
GK21447 Drosophila willistoni FBgn0223439 N 0.000
GL11369 Drosophila persimilis FBgn0148978 N 0.000
GM15940 Drosophila sechellia FBgn0170856 N 0.000
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 0.000
ISCW017896 Ixodes scapularis ISCW017896 N 0.000
LOC100062395 Equus caballus ENSECAG00000000266 N 0.000
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.000
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.000
nasonia_NCBI_hmm137104 Nasonia vitripennis nasonia_NCBI_hmm137104 N 0.000
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.000
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.000
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.000
RYBP Sorex araneus ENSSARG00000011312 N 0.000
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.000
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.000
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.000
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.000
RYBP Vicugna pacos ENSVPAG00000007715 N 0.000
rybp Xenopus tropicalis ENSXETG00000015914 N 0.000
RYBP Drosophila melanogaster FBgn0034763 N 0.000
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.000
RYBP Pan troglodytes ENSPTRG00000015105 N 0.000
RYBP Gallus gallus ENSGALG00000007790 N 0.000
Rybp Mus musculus ENSMUSG00000072872 N 0.000
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.000
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.000
RYBP Echinops telfairi ENSETEG00000015145 N 0.000
RYBP Monodelphis domestica ENSMODG00000003921 N 0.000
RYBP Macaca mulatta ENSMMUG00000007128 N 0.000
RYBP Homo sapiens ENSG00000163602 N 0.000
RYBP Loxodonta africana ENSLAFG00000003133 N 0.000
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.000
RYBP Microcebus murinus ENSMICG00000014365 N 0.000
RYBP Anolis carolinensis ENSACAG00000014789 N 0.000
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.000
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.000
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.000
RYBP Canis familiaris ENSCAFG00000006441 N 0.000
rybpa Danio rerio ENSDARG00000037773 N 0.000
rybpb Danio rerio ENSDARG00000053459 N 0.000
XP_001183392.1 Strongylocentrotus purpuratus XP_001183392.1 N 0.000
XP_780545.1 Strongylocentrotus purpuratus XP_780545.1 N 0.000
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.000
yaf2 Xenopus tropicalis ENSXETG00000006795 N 0.000
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.000
YAF2 Homo sapiens ENSG00000015153 N 0.000
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.000
yaf2 Danio rerio ENSDARG00000015966 N 0.000
YAF2 Echinops telfairi ENSETEG00000001634 N 0.000
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.000
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.000
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.000
Yaf2 Mus musculus ENSMUSG00000022634 N 0.000
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.000
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.000
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.000
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.000
YAF2 Oryzias latipes ENSORLG00000013064 N 0.000
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.000
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.000
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.000
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.000
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.000
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.000
YAF2 Oryzias latipes ENSORLG00000003255 N 0.000
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.000
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.000
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.000
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.000
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.000
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.000