A6MKZ3_CALJA (Callithrix jacchus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCJAG00000022539 T18556_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.979
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.979
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.920
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.894
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.856
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000041146 KH 15 75
ENSCJAP00000041146 KH 99 162
ENSCJAP00000041146 KH 281 343

Links

Other KH family RBPs
Other Callithrix jacchus RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29807.m000475 Ricinus communis 29807.m000475 N 0.000
cassava24191.valid.m1 Manihot esculenta cassava24191.valid.m1 N 0.000
Cucsa.116130 Cucumis sativus Cucsa.116130 N 0.000
Glyma05g08160.1 Glycine max Glyma05g08160.1 N 0.000
Glyma17g12730.1 Glycine max Glyma17g12730.1 N 0.000
Medtr8g118890 Medicago truncatula Medtr8g118890 N 0.000