CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KRR1
(
Danio rerio
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSDARG00000011246
T18613_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000020316
KH
152
201
FVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSALGPFNGLKEVRKVV
Links
Other
KH
family RBPs
Other
Danio rerio
RBPs
141 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
30169.m006347
Ricinus communis
30169.m006347
N
0.000
B9GLB9_POPTR
Populus trichocarpa
POPTR_0001s03940
N
0.000
cassava12386.valid.m1
Manihot esculenta
cassava12386.valid.m1
N
0.000
cassava12387.valid.m1
Manihot esculenta
cassava12387.valid.m1
N
0.000
cassava12388.valid.m1
Manihot esculenta
cassava12388.valid.m1
N
0.000
cassava12389.valid.m1
Manihot esculenta
cassava12389.valid.m1
N
0.000
cassava18203.valid.m1
Manihot esculenta
cassava18203.valid.m1
N
0.000
cassava18204.valid.m1
Manihot esculenta
cassava18204.valid.m1
N
0.000
cassava18205.valid.m1
Manihot esculenta
cassava18205.valid.m1
N
0.000
cassava20494.m1
Manihot esculenta
cassava20494.m1
N
0.000
cassava20495.m1
Manihot esculenta
cassava20495.m1
N
0.000
cassava30727.valid.m1
Manihot esculenta
cassava30727.valid.m1
N
0.000
cassava30728.valid.m1
Manihot esculenta
cassava30728.valid.m1
N
0.000
cassava30729.valid.m1
Manihot esculenta
cassava30729.valid.m1
N
0.000
cassava35657.valid.m1
Manihot esculenta
cassava35657.valid.m1
N
0.000
cassava35658.valid.m1
Manihot esculenta
cassava35658.valid.m1
N
0.000
cassava35659.valid.m1
Manihot esculenta
cassava35659.valid.m1
N
0.000
cassava35660.valid.m1
Manihot esculenta
cassava35660.valid.m1
N
0.000
cassava35661.valid.m1
Manihot esculenta
cassava35661.valid.m1
N
0.000
cassava35662.valid.m1
Manihot esculenta
cassava35662.valid.m1
N
0.000
cassava35663.valid.m1
Manihot esculenta
cassava35663.valid.m1
N
0.000
cassava35665.valid.m1
Manihot esculenta
cassava35665.valid.m1
N
0.000
cassava35666.valid.m1
Manihot esculenta
cassava35666.valid.m1
N
0.000
cassava35667.valid.m1
Manihot esculenta
cassava35667.valid.m1
N
0.000
cassava38866.m1
Manihot esculenta
cassava38866.m1
N
0.000
cassava38867.m1
Manihot esculenta
cassava38867.m1
N
0.000
mgf013935m
Mimulus guttatus
mgf013935m
N
0.000