KRR1 (Danio rerio)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDARG00000011246 T18613_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000020316 KH 152 201

Links

Other KH family RBPs
Other Danio rerio RBPs

141 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 1.000
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.980
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.980
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.960
Krr1 Mus musculus ENSMUSG00000063334 N 0.960
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.960
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.960
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.960
LOC100050169 Equus caballus ENSECAG00000017498 N 0.960
KRR1 Sorex araneus ENSSARG00000009967 N 0.940
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.940
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.940
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.940
KRR1 Sus scrofa ENSSSCG00000000520 N 0.940
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.940
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.940
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.940
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.940
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.940
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.940
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.940
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.940
KRR1 Felis catus ENSFCAG00000005207 N 0.940
KRR1 Homo sapiens ENSG00000111615 N 0.940
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.940
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.940
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.940
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.940
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.940
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.940
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.920
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.920
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.920
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.902
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.902
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.900
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.880
KRR1 Oryzias latipes ENSORLG00000019616 N 0.875
ENSETEG00000001656 Echinops telfairi ENSETEG00000001656 N 0.860
KRR1 Procavia capensis ENSPCAG00000010269 N 0.840
KRR1 Microcebus murinus ENSMICG00000015127 N 0.840
KRR1 Saccharomyces cerevisiae YCL059C N 0.820
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.820
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.820
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.820
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.820
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.820
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.820
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.820
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.820
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.820
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.820
KRR1 Myotis lucifugus ENSMLUG00000002339 N 0.820
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.800
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.800
AAH72210 Xenopus laevis AAH72210 N 0.789
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.784
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.784
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.784
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.780
AGAP007912 Anopheles gambiae AGAP007912 N 0.780
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.780
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.780
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.780
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.780
KRR1 Candida albicans orf19.661 N 0.780
UM03241 Ustilago maydis UM03241 N 0.780
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.780
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.780
CTRG_04103 Candida tropicalis CTRG_04103 N 0.780
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.780
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.780
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.780
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.780
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.780
AAH41273 Xenopus laevis AAH41273 N 0.776
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.774
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.760
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.760
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.760
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.760
GJ19628 Drosophila virilis FBgn0206770 N 0.760
GK24616 Drosophila willistoni FBgn0226576 N 0.760
GE15854 Drosophila yakuba FBgn0233416 N 0.760
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.760
GL18627 Drosophila persimilis FBgn0156228 N 0.760
GI18007 Drosophila mojavensis FBgn0140747 N 0.760
dbe Drosophila melanogaster FBgn0020305 N 0.760
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.760
GG24622 Drosophila erecta FBgn0116754 N 0.760
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.760
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.760
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.760
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.760
XP_002489989.1 Pichia pastoris XP_002489989.1 N 0.750
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.745
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.745
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.740
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.740
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.740
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.740
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.740
PK22510.1 Cannabis sativa PK22510.1 N 0.740
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.740
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.740
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.740
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.740
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.740
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.740
EDP43963.1 Malassezia globosa EDP43963.1 N 0.740
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.725
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.725
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.720
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.720
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.720
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.720
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.720
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.720
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.720
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.720
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.720
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.720
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.720
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.720
NCU07041 Neurospora crassa NCU07041 N 0.720
PASA_GEN_0400107 Daphnia pulex PASA_GEN_0400107 N 0.719
Sjc_0083680 Schistosoma japonicum Sjc_0083680 N 0.706
Smp_115060 Schistosoma mansoni Smp_115060 N 0.706
CMR456C Cyanidioschyzon merolae CMR456C N 0.700
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.700
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.700
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.700
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.700
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.700
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.700
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.700
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.700
MDP0000221204 Malus x domestica MDP0000221204 N 0.700
MDP0000130613 Malus x domestica MDP0000130613 N 0.700
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.700
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.700