Hnrnpk (Rattus norvegicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSRNOG00000019113 T19442_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
hnRNPK
M026_0.6 		Homo sapiens CCAWMCC RNAcompete
Ray et al.(2013)
RNCMPT00026 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000025915 KH 44 104
ENSRNOP00000025915 KH 146 209
ENSRNOP00000025915 KH 389 451
ENSRNOP00000025980 KH 44 104
ENSRNOP00000025980 KH 146 209
ENSRNOP00000025980 KH 389 451

Links

Other KH family RBPs
Other Rattus norvegicus RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30169.m006527 Ricinus communis 30169.m006527 I 0.000
ATPTB2 Arabidopsis thaliana AT5G53180-TAIR-G I 0.000
cassava29285.valid.m1 Manihot esculenta cassava29285.valid.m1 I 0.000
cassava7218.valid.m1 Manihot esculenta cassava7218.valid.m1 I 0.000
cassava7219.valid.m1 Manihot esculenta cassava7219.valid.m1 I 0.000
Cucsa.202010 Cucumis sativus Cucsa.202010 I 0.000
Glyma04g41660.1 Glycine max Glyma04g41660.1 I 0.000
Glyma06g13130.1 Glycine max Glyma06g13130.1 I 0.000
Glyma13g08170.1 Glycine max Glyma13g08170.1 I 0.000
Glyma14g30490.1 Glycine max Glyma14g30490.1 I 0.000
GSVIVG00028703001 Vitis vinifera GSVIVG00028703001 I 0.000
MDP0000236223 Malus x domestica MDP0000236223 N 0.000
MDP0000269393 Malus x domestica MDP0000269393 I 0.000
Medtr3g124540 Medicago truncatula Medtr3g124540 I 0.000
mgf001230m Mimulus guttatus mgf001230m I 0.000
mgf005649m Mimulus guttatus mgf005649m I 0.000
PDK_20s1513061g004 Phoenix dactylifera PDK_20s1513061g004 I 0.000
ppa005791m Prunus persica ppa005791m I 0.000
XM_002865910.1 Arabidopsis lyrata fgenesh2_kg.8__1206__AT5G53180.1 I 0.000