MDP0000236223 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000236223 T57472_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000236223 RRM 20 78
MDP0000236223 RRM 124 181
MDP0000236223 RRM 249 291

Links

Other RRM family RBPs
Other Malus x domestica RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000274672 Malus x domestica MDP0000274672 N 0.956
Cucsa.202010 Cucumis sativus Cucsa.202010 I 0.944
ppa005791m Prunus persica ppa005791m I 0.872
MDP0000269393 Malus x domestica MDP0000269393 I 0.861
Glyma06g13130.1 Glycine max Glyma06g13130.1 I 0.856
Glyma14g30490.1 Glycine max Glyma14g30490.1 I 0.856
GSVIVG00028703001 Vitis vinifera GSVIVG00028703001 I 0.850
Glyma04g41660.1 Glycine max Glyma04g41660.1 I 0.850
Medtr3g124540 Medicago truncatula Medtr3g124540 I 0.845
30169.m006527 Ricinus communis 30169.m006527 I 0.844
Glyma13g08170.1 Glycine max Glyma13g08170.1 I 0.839
cassava7218.valid.m1 Manihot esculenta cassava7218.valid.m1 I 0.833
cassava7219.valid.m1 Manihot esculenta cassava7219.valid.m1 I 0.833
cassava29285.valid.m1 Manihot esculenta cassava29285.valid.m1 I 0.828
ATPTB2 Arabidopsis thaliana AT5G53180-TAIR-G I 0.806
XM_002865910.1 Arabidopsis lyrata fgenesh2_kg.8__1206__AT5G53180.1 I 0.806
mgf005649m Mimulus guttatus mgf005649m I 0.775
mgf001230m Mimulus guttatus mgf001230m I 0.770
PDK_20s1513061g004 Phoenix dactylifera PDK_20s1513061g004 I 0.729
e_gw1.30.357.1 Selaginella moellendorfii e_gw1.30.357.1 I 0.710
GRMZM2G058039 Zea mays GRMZM2G058039 I 0.702
SB03G028150 Sorghum bicolor Sb03g028150 I 0.701