HCAG_00086 (Histoplasma capsulatum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 HCAG_00086 T29446_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
HCAG_00086T0 RRM 30 88
HCAG_00086T0 RRM 122 183

Links

Other RRM family RBPs
Other Histoplasma capsulatum RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.763
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.750
AFUA_3G10100 Aspergillus fumigatus CADAFUAG00005849 N 0.720
An16g03890 Aspergillus niger CADANGAG00012860 N 0.750
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.763
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.727
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.714
BDBG_06361 Blastomyces dermatitidis BDBG_06361 N 0.752
CIMG_03560 Coccidioides immitis CIMG_03560 N 0.840
CPSG_02395 Coccidioides posadasii CPSG_02395 N 0.792
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.750
MCYG_00727 Microsporum canis MCYG_00727 N 0.702
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.723
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.714
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.783
TESG_02526 Trichophyton tonsurans TESG_02526 N 0.805