AO090003000544 (Aspergillus oryzae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADAORAG00001164 T33665_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADAORAP00001145 RRM 9 71
CADAORAP00001145 RRM 103 167

Links

Other RRM family RBPs
Other Aspergillus oryzae RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.977
An16g03890 Aspergillus niger CADANGAG00012860 N 0.961
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.953
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.930
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.885
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.853
CIMG_03560 Coccidioides immitis CIMG_03560 N 0.817
CPSG_02395 Coccidioides posadasii CPSG_02395 N 0.817
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.794
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.786
AFUA_3G10100 Aspergillus fumigatus CADAFUAG00005849 N 0.781
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.777
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.774
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.771
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.767
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.762
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.762
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.759
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.758
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.758
NCU07069 Neurospora crassa NCU07069 N 0.758
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.752
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.752
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.746
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.744
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.744
TESG_02526 Trichophyton tonsurans TESG_02526 N 0.744
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.740
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.735
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.729
HCAG_00086 Histoplasma capsulatum HCAG_00086 N 0.727
AB02127.1 Alternaria brassicicola AB02127.1 N 0.719