CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEQG_02286
(
Trichophyton equinum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TEQG_02286
T31029_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_02286T0
RRM
111
184
VYVTTIPLDATVSEISSLFSKCGVIAEEIDSGKPRIKMYTDEQGTFKGDALVVYFRPESVNLAIQMLDDTDFRF
Links
Other
RRM
family RBPs
Other
Trichophyton equinum
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFLA_043160
Aspergillus flavus
CADAFLAG00005643
N
0.000
AFUA_2G02160
Aspergillus fumigatus
CADAFUAG00003346
N
0.000
An07g06750
Aspergillus niger
CADANGAG00005948
N
0.000
ANIA_04595
Aspergillus nidulans
CADANIAG00005841
N
0.000
BDBG_05107
Blastomyces dermatitidis
BDBG_05107
N
0.000
fgenesh1_pg.00009_#_218
Aspergillus carbonarius
fgenesh1_pg.00009_#_218
N
0.000
FGSG_06067
Fusarium graminearum
FGSG_06067
N
0.000
HCAG_08820
Histoplasma capsulatum
HCAG_08820
N
0.000
NFIA_034530
Neosartorya fischeri
CADNFIAG00002955
N
0.000
NUPL2
Ochotona princeps
ENSOPRG00000013966
N
0.000
PABG_07018
Paracoccidioides brasiliensis
PABG_07018
N
0.000
Pc20g04370
Penicillium chrysogenum
Pc20g04370
N
0.000